Sib-pair Command: share

ClassAnalysis and data manipulation command
Arguments [pairs]

Lists all relative pairs, and the mean of IBS at all marker loci where both members of the pair are typed at the marker, comparing this to that expected if related as specified by the pedigree structure, allele frequencies and linkage map. The output is to the standard output. The default lists individuals whose Z score measuring deviation from expected exceeds 1.65 with any other relative. The pairs option prints the statistic for each deviant pair, or all pairs if output is set to verbose.

The share command is not currently implemented in the Fortran 95 version of Sib-pair.

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