Class | Analysis and data manipulation command |
Name | cksib |
Arguments |
Lists all sib pairs, and the mean of IBS at all marker loci where both members of the pair are typed at the marker, comparing this to that expected if related as specified by the pedigree structure. The output is to the standard output.
Example:
>> cki ---------------------------------------------------- Estimated Prob(IBS=2) over all markers for sib-pairs ---------------------------------------------------- Pedigree Pers-1 Pers-2 ibs=2 Exp Dev Mrkrs 1 0115 0153 1.0000 0.7121 0.45 1 1 0116 0117 0.0000 0.7121 -0.96 1 1 0116 0118 1.0000 0.7121 0.45 1 1 0116 0121 1.0000 0.7121 0.45 1 1 0117 0118 0.0000 0.7121 -0.96 1
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