| Class | Analysis and data manipulation command |
| Name | normality |
| Arguments | <trait1> [...<traitN>] |
Calculate Filliben correlation (correlation between value and expected quantile under assumption of normality) for each quantitative trait. The test statistic for each trait is written to the locstat variable, accessible using the summary and drop commands.
Example:
>> read bin melaexpression.bin.gz
Read in 22 pedigrees, 22 individuals
1454712 variables (0.80 s)
Dataset occupies 35.442 Mb.
>> nor
Calculated Filliben correlations for 22277 traits.
>> sum tab
Intvl Midpt Count Histogram
---------------------------------------------------------
-0.8056 6
-0.6157 14
-0.4259 15
-0.2361 20
-0.0462 27
0.1436 40
0.3335 70
0.5233 519 **
0.7131 1534 ******
0.9030 20031 + **************************************************
0.9979 1 +
Median (IQR) = 0.9656 ( 0.9204 -- 0.9817)
Symmetry test J(.02) = -3.1601 (P=0.000)
| << (kaplan-meier) | Up to index | >> (rank) |