Summary of eQTL database
| Release date | cis and/or trans eQTLs | P-value threshold used to identify cis eQTLs | P-value threshold used to identify trans eQTLs | r2 threshold used to define sentinel eQTLs | r2 threshold used to identify eQTL proxies |
| 2017-05-17 | cis only | 2.3x10-9 (corrects for 21,742 genes, each tested for association with 1,000 SNPs [Davis et al, AJHG 2016]) | Not applicable | <0.10 | >0.80 |
Tissues grouped by disease relevance:
| Tissues/cells included | File name | eQTL datasets included |
| ASTHMA | ASTHMA.20170517.eqtl.proxies.list | Andiappan_NEUTROPHILS,Barreiro_DENDRITIC-MTBInfected,Barreiro_DENDRITIC-NotInfected,Battle_WHOLEBLOOD,Battle_WHOLEBLOOD-ase,Battle_WHOLEBLOOD-splice,Brumpton_LCLS,Caliskan_PBMCS-baseline,Caliskan_PBMCS-rhinovirus,Caliskan_PBMCS-rhinovirus-reQTL,Davenport_LEUCOCYTES,Dimas_FIBROBLASTS,Dimas_LCLS,Dimas_TCELLS,Dinarzo_WHOLEBLOOD,Ding_SKIN-LESIONAL,Ding_SKIN-NORMAL,Ding_SKIN-UNINVOLVED,Dixon_LCLS,Fairfax_BCELLS,Fairfax_MONOCYTES,Fairfax_MONOCYTES-IFN,Fairfax_MONOCYTES-LPS2,Fairfax_MONOCYTES-LPS24,Fairfax_MONOCYTES-NAIVE,Fehrmann_WHOLEBLOOD,Ferraro_Tconv,Ferraro_Tregs,Franco_WHOLEBLOOD-Influenza,Geuvadis_LCLS,Grundberg_LCLS,Grundberg_SKIN,GTE_FIBROBLASTS,GTE_LCLS,GTE_LUNG,GTE_SKIN,GTE_SPLEEN,GTE_WHOLEBLOOD,Hao_LUNG,Huang_LCLS,Huang_PBMCS,Huang_SKIN,Jansen_WHOLEBLOOD,Kasela_CD4TCELLS,Kasela_CD8TCELLS,Kim_MONOCYTES-Baseline,Kim_MONOCYTES-Differential,Kim_MONOCYTES-LPS,Kukurba_WHOLEBLOOD,Lee_DENDRITIC-Baseline,Lee_DENDRITIC-Flu,Lee_DENDRITIC-Flu-delta,Lee_DENDRITIC-IFNb,Lee_DENDRITIC-IFNb-delta,Lee_DENDRITIC-LPS,Lee_DENDRITIC-LPS-delta,LloydJones_WHOLEBLOOD,Luo_SMALLAIRWAYS,Murphy_CD4TCELLS,Naranbhai_NEUTROPHILS,Nedelec_MACROPHAGES-baseline,Nedelec_MACROPHAGES-baseline-asQTL,Nedelec_MACROPHAGES-listeria,Nedelec_MACROPHAGES-listeria-asQTL,Nedelec_MACROPHAGES-listeria-reQTL,Nedelec_MACROPHAGES-salmonella,Nedelec_MACROPHAGES-salmonella-asQTL,Nedelec_MACROPHAGES-salmonella-reQTL,Peters_BCELLS,Peters_CD4TCELLS,Peters_CD8TCELLS,Peters_MONOCYTES,Peters_NEUTROPHILS,Quach_MONOCYTES-baseline,Quach_MONOCYTES-IAV,Quach_MONOCYTES-LPS,Quach_MONOCYTES-Pam3CSK4,Quach_MONOCYTES-R848,Raj_CD4TCELLS,Raj_MONOCYTES,Walsh_WHOLEBLOOD,Westra_WHOLEBLOOD,Yao_WHOLEBLOOD,Ye_CD4TCELLS-48h328,Ye_CD4TCELLS-48hTh17,Ye_CD4TCELLS-4h328,Ye_CD4TCELLS-4hIFNb,Ye_CD4TCELLS-UNST,Zeller_MONOCYTES,Zhernakova_WHOLEBLOOD-exon-primary,Zhernakova_WHOLEBLOOD-exonratio-primary,Zhernakova_WHOLEBLOOD-gene-contextspecific,Zhernakova_WHOLEBLOOD-gene-primary,Zhernakova_WHOLEBLOOD-polyAratio-primary |