| Class | Global |
| Name | set ibd |
| Arguments | [<maximum map distance> [<maximum number of markers per clump>]] |
Controls the maximum distance along a set of markers to be automatically combined for multipoint ibd estimation by the qtlpair command. Defaults to 0.1 cM. If a second argument is given, this limits the maximum number of markers in a set (default is the hard coded maximum of 10).
Example:
>> set ibd
NOTE: Multipoint IBD estimation is carried out using sets
of up to 10 adjacent markers separated by <= 0.100 cM.
>> set ibd 0.5
NOTE: Multipoint IBD estimation is carried out using sets
of up to 10 adjacent markers separated by <= 0.500 cM.
See also:
| qtlpair | sibs or pedigree VC linkage |
| << (set tdt) | Up to index | >> (set model) |