| Class | Global |
| Name | set mincount |
| Arguments | <minimum numerator of P-value> |
Controls the number used for Monte Carlo simulation of a P-value. Default is 20 pseudosamples with a test statistic more extreme than that for the observed statistic. Set mincount equal to iter if this is not desired.
Example:
>> include linclex.in >> set mincount NOTE: Minimum numerator for MC P-values 20 >> hwe -------------------------------------------------- Hardy-Weinberg equilibrium for marker loci -------------------------------------------------- Marker Typed Genos Chi-square Asy P Emp P Iters ---------- ------ ------ ---------- ------ ------ ------ D13S162 66 36 23.9 0.6846 0.4444 45 HWE . D13S160 66 21 15.0 0.4498 0.6250 32 HWE . D13S170 58 66 68.3 0.1071 0.0199 201 HWE + >> set mincount 100 NOTE: Minimum numerator for MC P-values 100 >> hwe -------------------------------------------------- Hardy-Weinberg equilibrium for marker loci -------------------------------------------------- Marker Typed Genos Chi-square Asy P Emp P Iters ---------- ------ ------ ---------- ------ ------ ------ D13S162 66 36 23.9 0.6846 0.3433 201 HWE . D13S160 66 21 15.0 0.4498 0.6369 157 HWE . D13S170 58 66 68.3 0.1071 0.0249 201 HWE + >> set plevel 1 >> hwe
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