Class | Data Declaration command |
Name | read locus merlin |
Arguments | <locus file name> [xli] [snp] |
Read locus names, types from a Merlin-format locus (.dat) file. Markers are treated as sex-linked when the xli modifier is used. Markers are stored as SNPs when the snp modifier is used, with reduced memory consumption.
Example:
>> file cat /main/home/davidD/sim/GxE/merlin.dat
M marker008
M marker009
M marker010
T dBP
C env
>> read locus merlin merlin.dat
Read in names of 5 loci from locus file.
>> lis
Locus Type Position
--------------- ---- ----------------
marker008 m 6-- 7 M marker008
marker009 m 8-- 9 M marker009
marker010 m 10-- 11 M marker010
dBP q 12 T dBP
env q 13 C env
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