| Class | Analysis and data manipulation command |
| Name | combine |
| Arguments | <marker1> [...<markerN>] [<threshold>]. |
Pool rare alleles for a marker into one new allele. "Rare" defaults to a frequency of 5%, but can be changed via the last parameter on the command line.
Example:
>> combine $m
| << (recode) | Up to index | >> (swap) |