Genetic Epidemiology, Translational Neurogenomics, Psychiatric Genetics and Statistical Genetics Laboratories investigate the pattern of disease in families, particularly identical and non-identical twins, to assess the relative importance of genes and environment in a variety of important health problems.
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PMID
38395541
TITLE
Normative modelling of brain morphometry across the lifespan with CentileBrain: algorithm benchmarking and model optimisation.
ABSTRACT
The value of normative models in research and clinical practice relies on their robustness and a systematic comparison of different modelling algorithms and parameters; however, this has not been done to date. We aimed to identify the optimal approach for normative modelling of brain morphometric data through systematic empirical benchmarking, by quantifying the accuracy of different algorithms and identifying parameters that optimised model performance. We developed this framework with regional morphometric data from 37 407 healthy individuals (53% female and 47% male; aged 3-90 years) from 87 datasets from Europe, Australia, the USA, South Africa, and east Asia following a comparative evaluation of eight algorithms and multiple covariate combinations pertaining to image acquisition and quality, parcellation software versions, global neuroimaging measures, and longitudinal stability. The multivariate fractional polynomial regression (MFPR) emerged as the preferred algorithm, optimised with non-linear polynomials for age and linear effects of global measures as covariates. The MFPR models showed excellent accuracy across the lifespan and within distinct age-bins and longitudinal stability over a 2-year period. The performance of all MFPR models plateaued at sample sizes exceeding 3000 study participants. This model can inform about the biological and behavioural implications of deviations from typical age-related neuroanatomical changes and support future study designs. The model and scripts described here are freely available through CentileBrain.
Copyright © 2024 The Author(s). Published by Elsevier Ltd. This is an Open Access article under the CC BY 4.0 license. Published by Elsevier Ltd.. All rights reserved.
DATE PUBLISHED
2024 Mar
HISTORY
PUBSTATUS PUBSTATUSDATE
received 2023/03/20
revised 2023/10/04
accepted 2023/12/01
medline 2024/02/26 06:42
pubmed 2024/02/24 11:42
entrez 2024/02/23 21:02
pmc-release 2024/03/12
AUTHORS
NAME COLLECTIVENAME LASTNAME FORENAME INITIALS AFFILIATION AFFILIATIONINFO
Ge R Ge Ruiyang R Djavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, BC, Canada.
Yu Y Yu Yuetong Y Djavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, BC, Canada.
Qi YX Qi Yi Xuan YX Djavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, BC, Canada.
Fan YN Fan Yu-Nan YN Djavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, BC, Canada.
Chen S Chen Shiyu S Djavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, BC, Canada.
Gao C Gao Chuntong C Djavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, BC, Canada.
Haas SS Haas Shalaila S SS Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
New F New Faye F Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Boomsma DI Boomsma Dorret I DI Netherlands Twin Register, Department of Biological Psychology, Vrije Universiteit, Amsterdam, Netherlands.
Brodaty H Brodaty Henry H Centre for Healthy Brain Ageing, University of New South Wales, Sydney, NSW, Australia.
Brouwer RM Brouwer Rachel M RM Department of Complex Trait Genetics, Center for Neurogenomics and Cognitive Research, Vrije Universiteit, Amsterdam, Netherlands.
Buckner R Buckner Randy R Center for Brain Science, Harvard University, Cambridge, MA, USA.
Caseras X Caseras Xavier X Centre for Neuropsychiatric Genetics and Genomics, Cardiff University, Cardiff, Wales, UK.
Crivello F Crivello Fabrice F Groupe d'Imagerie Neurofonctionnelle-Institut des Maladies Neurodégénératives, Université de Bordeaux, CNRS UMR 5293, Bordeaux, France.
Crone EA Crone Eveline A EA Erasmus School of Social and Behavioural Sciences, Erasmus University Rotterdam, Rotterdam, Netherlands.
Erk S Erk Susanne S Division of Mind and Brain Research, Department of Psychiatry and Psychotherapy, Charité-Universitätsmedizin Berlin, Berlin, Germany.
Fisher SE Fisher Simon E SE Language and Genetics Department, Max Planck Institute for Psycholinguistics, Nijmegen, Netherlands.
Franke B Franke Barbara B Departments of Human Genetics, Psychiatry and Cognitive Neuroscience, Donders Institute for Brain, Cognition and Behaviour, Radboud University Medical Center, Nijmegen, Netherlands.
Glahn DC Glahn David C DC Department of Psychiatry and Behavioral Sciences, Boston Children's Hospital, Boston, MA, USA.
Dannlowski U Dannlowski Udo U Department of Psychiatry and Psychotherapy, University of Münster, Münster, Germany.
Grotegerd D Grotegerd Dominik D Department of Psychiatry and Psychotherapy, University of Münster, Münster, Germany.
Gruber O Gruber Oliver O Section for Experimental Psychopathology and Neuroimaging, Department of General Psychiatry, Heidelberg University, Heidelberg, Germany.
Hulshoff Pol HE Hulshoff Pol Hilleke E HE Department of Experimental Psychology, Helmholtz Institute, Utrecht University, Utrecht, Netherlands.
Schumann G Schumann Gunter G Centre for Population Neuroscience and Stratified Medicine, Institute for Science and Technology of Brain-inspired Intelligence, Fudan University, Shanghai, China; PONS Centre, Department of Psychiatry and Clinical Neuroscience, CCM, Charite Universitätsmedizin Berlin, Berlin, Germany.
Tamnes CK Tamnes Christian K CK Department of Psychology, University of Oslo, Oslo, Norway.
Walter H Walter Henrik H Division of Mind and Brain Research, Department of Psychiatry and Psychotherapy, Charité-Universitätsmedizin Berlin, Berlin, Germany.
Wierenga LM Wierenga Lara M LM Brain and Development Research Center, Leiden University, Leiden, Netherlands.
Jahanshad N Jahanshad Neda N Mark and Mary Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, Marina del Rey, CA, USA.
Thompson PM Thompson Paul M PM Mark and Mary Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of USC, University of Southern California, Marina del Rey, CA, USA.
Frangou S Frangou Sophia S Djavad Mowafaghian Centre for Brain Health, University of British Columbia, Vancouver, BC, Canada; Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, USA. Electronic address: sophia.frangou@gmail.com.
ENIGMA Lifespan Working Group
INVESTIGATORS
LASTNAME FORENAME INITIALS AFFILIATION
Agartz Ingrid I
Asherson Philip P
Ayesa-Arriola Rosa R
Banaj Nerisa N
Banaschewski Tobias T
Baumeister Sarah S
Bertolino Alessandro A
Borgwardt Stefan S
Bourque Josiane J
Brandeis Daniel D
Breier Alan A
Buitelaar Jan K JK
Cannon Dara M DM
Cervenka Simon S
Conrod Patricia J PJ
Crespo-Facorro Benedicto B
Davey Christopher G CG
de Haan Lieuwe L
de Zubicaray Greig I GI
Di Giorgio Annabella A
Frodl Thomas T
Gruner Patricia P
Gur Raquel E RE
Gur Ruben C RC
Harrison Ben J BJ
Hatton Sean N SN
Hickie Ian I
Howells Fleur M FM
Huyser Chaim C
Jernigan Terry L TL
Jiang Jiyang J
Joska John A JA
Kahn René S RS
Kalnin Andrew J AJ
Kochan Nicole A NA
Koops Sanne S
Kuntsi Jonna J
Lagopoulos Jim J
Lazaro Luisa L
Lebedeva Irina S IS
Lochner Christine C
Martin Nicholas G NG
Mazoyer Bernard B
McDonald Brenna C BC
McDonald Colm C
McMahon Katie L KL
Medland Sarah S
Modabbernia Amirhossein A
Mwangi Benson B
Nakao Tomohiro T
Nyberg Lars L
Piras Fabrizio F
Portella Maria J MJ
Qiu Jiang J
Roffman Joshua L JL
Sachdev Perminder S PS
Sanford Nicole N
Satterthwaite Theodore D TD
Saykin Andrew J AJ
Sellgren Carl M CM
Sim Kang K
Smoller Jordan W JW
Soares Jair C JC
Sommer Iris E IE
Spalletta Gianfranco G
Stein Dan J DJ
Thomopoulos Sophia I SI
Tomyshev Alexander S AS
Tordesillas-Gutiérrez Diana D
Trollor Julian N JN
van 't Ent Dennis D
van den Heuvel Odile A OA
van Erp Theo Gm TG
van Haren Neeltje Em NE
Vecchio Daniela D
Veltman Dick J DJ
Wang Yang Y
Weber Bernd B
Wei Dongtao D
Wen Wei W
Westlye Lars T LT
Williams Steven Cr SC
Wright Margaret J MJ
Wu Mon-Ju MJ
Yu Kevin K
JOURNAL
VOLUME: 6
ISSUE: 3
TITLE: The Lancet. Digital health
ISOABBREVIATION: Lancet Digit Health
YEAR: 2024
MONTH: Mar
DAY:
MEDLINEDATE:
SEASON:
CITEDMEDIUM: Internet
ISSN: 2589-7500
ISSNTYPE: Electronic
MEDLINE JOURNAL
MEDLINETA: Lancet Digit Health
COUNTRY: England
ISSNLINKING: 2589-7500
NLMUNIQUEID: 101751302
PUBLICATION TYPE
PUBLICATIONTYPE TEXT
Journal Article
Review
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
COMMENTS AND CORRECTIONS
REFTYPE REFSOURCE REFPMID NOTE
UpdateOf bioRxiv. 2023 Dec 02:2023.01.30.523509. doi: 10.1101/2023.01.30.523509. 38076938
GRANTS
GRANTID AGENCY COUNTRY
P30 AG010133 NIA NIH HHS United States
R01 AG067420 NIA NIH HHS United States
R01 MH104284 NIMH NIH HHS United States
R01 MH116147 NIMH NIH HHS United States
R01 MH113619 NIMH NIH HHS United States
T32 MH122394 NIMH NIH HHS United States
U54 EB020403 NIBIB NIH HHS United States
R01 HD050735 NICHD NIH HHS United States
UL1 TR004419 NCATS NIH HHS United States
UL1 TR000153 NCATS NIH HHS United States
R01 CA101318 NCI NIH HHS United States
U24 RR025736 NCRR NIH HHS United States
R01 AG019771 NIA NIH HHS United States
UL1 RR025761 NCRR NIH HHS United States
P50 HD105351 NICHD NIH HHS United States
R01 MH117014 NIMH NIH HHS United States
R01 MH042191 NIMH NIH HHS United States
U24 RR021992 NCRR NIH HHS United States
R01 MH090553 NIMH NIH HHS United States
RC2 DA029475 NIDA NIH HHS United States
GENERAL NOTE
KEYWORDS
MESH HEADINGS
DESCRIPTORNAME QUALIFIERNAME
Humans
Male
Female
Longevity
Benchmarking
Brain diagnostic imaging
Models, Statistical diagnostic imaging
Algorithms diagnostic imaging
SUPPLEMENTARY MESH
GENE SYMBOLS
CHEMICALS
OTHER ID's