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PMID |
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TITLE |
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Common schizophrenia alleles are enriched in mutation-intolerant genes and in regions under strong background selection. |
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ABSTRACT |
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Schizophrenia is a debilitating psychiatric condition often associated with poor quality of life and decreased life expectancy. Lack of progress in improving treatment outcomes has been attributed to limited knowledge of the underlying biology, although large-scale genomic studies have begun to provide insights. We report a new genome-wide association study of schizophrenia (11,260 cases and 24,542 controls), and through meta-analysis with existing data we identify 50 novel associated loci and 145 loci in total. Through integrating genomic fine-mapping with brain expression and chromosome conformation data, we identify candidate causal genes within 33 loci. We also show for the first time that the common variant association signal is highly enriched among genes that are under strong selective pressures. These findings provide new insights into the biology and genetic architecture of schizophrenia, highlight the importance of mutation-intolerant genes and suggest a mechanism by which common risk variants persist in the population. |
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DATE PUBLISHED |
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HISTORY |
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PUBSTATUS |
PUBSTATUSDATE |
received |
2017/09/15 |
accepted |
2018/01/07 |
entrez |
2018/02/28 06:00 |
pubmed |
2018/02/28 06:00 |
medline |
2018/02/28 06:00 |
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AUTHORS |
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NAME |
COLLECTIVENAME |
LASTNAME |
FORENAME |
INITIALS |
AFFILIATION |
AFFILIATIONINFO |
Pardinas AF |
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Pardinas |
Antonio F |
AF |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
Holmans P |
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Holmans |
Peter |
P |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
Pocklington AJ |
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Pocklington |
Andrew J |
AJ |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
Escott-Price V |
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Escott-Price |
Valentina |
V |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
Ripke S |
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Ripke |
Stephan |
S |
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Department of Psychiatry and Psychotherapy, Charité, Campus Mitte, Berlin, Germany. |
Carrera N |
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Carrera |
Noa |
N |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
Legge SE |
|
Legge |
Sophie E |
SE |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
Bishop S |
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Bishop |
Sophie |
S |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
Cameron D |
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Cameron |
Darren |
D |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
Hamshere ML |
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Hamshere |
Marian L |
ML |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
Han J |
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Han |
Jun |
J |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
Hubbard L |
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Hubbard |
Leon |
L |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
Lynham A |
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Lynham |
Amy |
A |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
Mantripragada K |
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Mantripragada |
Kiran |
K |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
Rees E |
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Rees |
Elliott |
E |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
MacCabe JH |
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MacCabe |
James H |
JH |
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Department of Psychosis Studies, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK. |
McCarroll SA |
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McCarroll |
Steven A |
SA |
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Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA. |
Baune BT |
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Baune |
Bernhard T |
BT |
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Discipline of Psychiatry, University of Adelaide, Adelaide, South Australia, Australia. |
Breen G |
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Breen |
Gerome |
G |
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NIHR Biomedical Research Centre for Mental Health, Maudsley Hospital and Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK. |
Byrne EM |
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Byrne |
Enda M |
EM |
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Institute for Molecular Bioscience, University of Queensland, Brisbane, Queensland, Australia. |
Dannlowski U |
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Dannlowski |
Udo |
U |
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Department of Psychiatry and Psychotherapy, University of Münster, Münster, Germany. |
Eley TC |
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Eley |
Thalia C |
TC |
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MRC Social, Genetic and Developmental Psychiatry Centre, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK. |
Hayward C |
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Hayward |
Caroline |
C |
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Medical Genetics Section, Centre for Genomic and Experimental Medicine, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK. |
Martin NG |
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Martin |
Nicholas G |
NG |
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QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia. |
McIntosh AM |
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McIntosh |
Andrew M |
AM |
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Centre for Cognitive Ageing and Cognitive Epidemiology, University of Edinburgh, Edinburgh, UK. |
Plomin R |
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Plomin |
Robert |
R |
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MRC Social, Genetic and Developmental Psychiatry Centre, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK. |
Porteous DJ |
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Porteous |
David J |
DJ |
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Medical Genetics Section, Centre for Genomic and Experimental Medicine, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK. |
Wray NR |
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Wray |
Naomi R |
NR |
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Institute for Molecular Bioscience, University of Queensland, Brisbane, Queensland, Australia. |
Caballero A |
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Caballero |
Armando |
A |
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Departamento de Bioquímica, Genética e Inmunología. Facultad de Biología, Universidad de Vigo, Vigo, Spain. |
Geschwind DH |
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Geschwind |
Daniel H |
DH |
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Department of Neurology, Center for Autism Research and Treatment, Semel Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA. |
Huckins LM |
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Huckins |
Laura M |
LM |
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Division of Psychiatric Genomics, Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, USA. |
Ruderfer DM |
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Ruderfer |
Douglas M |
DM |
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Division of Psychiatric Genomics, Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, USA. |
Santiago E |
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Santiago |
Enrique |
E |
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Departamento de Biología Funcional. Facultad de Biología, Universidad de Oviedo, Oviedo, Spain. |
Sklar P |
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Sklar |
Pamela |
P |
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Division of Psychiatric Genomics, Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, USA. |
Stahl EA |
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Stahl |
Eli A |
EA |
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Division of Psychiatric Genomics, Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, USA. |
Won H |
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Won |
Hyejung |
H |
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Department of Neurology, Center for Autism Research and Treatment, Semel Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, CA, USA. |
Agerbo E |
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Agerbo |
Esben |
E |
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National Centre for Register-Based Research, Aarhus University, Aarhus, Denmark. |
Als TD |
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Als |
Thomas D |
TD |
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Department of Biomedicine-Human Genetics, Aarhus University, Aarhus, Denmark. |
Andreassen OA |
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Andreassen |
Ole A |
OA |
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NORMENT, KG Jebsen Centre for Psychosis Research, Division of Mental Health and Addiction, Oslo University Hospital, Oslo, Norway. |
Bækvad-Hansen M |
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Bækvad-Hansen |
Marie |
M |
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Center for Neonatal Screening, Department for Congenital Disorders, Statens Serum Institut, Copenhagen, Denmark. |
Mortensen PB |
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Mortensen |
Preben Bo |
PB |
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iSEQ, Center for Integrative Sequencing, Aarhus University, Aarhus, Denmark. |
Pedersen CB |
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Pedersen |
Carsten Bøcker |
CB |
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National Centre for Register-Based Research, Aarhus University, Aarhus, Denmark. |
Børglum AD |
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Børglum |
Anders D |
AD |
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Department of Biomedicine-Human Genetics, Aarhus University, Aarhus, Denmark. |
Bybjerg-Grauholm J |
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Bybjerg-Grauholm |
Jonas |
J |
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Center for Neonatal Screening, Department for Congenital Disorders, Statens Serum Institut, Copenhagen, Denmark. |
Djurovic S |
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Djurovic |
Srdjan |
S |
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Department of Medical Genetics, Oslo University Hospital, Oslo, Norway. |
Durmishi N |
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Durmishi |
Naser |
N |
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Department of Child and Adolescent Psychiatry, University Clinic of Psychiatry, Skopje, Macedonia. |
Pedersen MG |
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Pedersen |
Marianne Giørtz |
MG |
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National Centre for Register-Based Research, Aarhus University, Aarhus, Denmark. |
Golimbet V |
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Golimbet |
Vera |
V |
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Department of Clinical Genetics, Mental Health Research Center, Moscow, Russia. |
Grove J |
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Grove |
Jakob |
J |
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Bioinformatics Research Centre, Aarhus University, Aarhus, Denmark. |
Hougaard DM |
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Hougaard |
David M |
DM |
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Center for Neonatal Screening, Department for Congenital Disorders, Statens Serum Institut, Copenhagen, Denmark. |
Mattheisen M |
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Mattheisen |
Manuel |
M |
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Department of Biomedicine-Human Genetics, Aarhus University, Aarhus, Denmark. |
Molden E |
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Molden |
Espen |
E |
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Center for Psychopharmacology, Diakonhjemmet Hospital, Oslo, Norway. |
Mors O |
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Mors |
Ole |
O |
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Psychosis Research Unit, Aarhus University Hospital, Risskov, Denmark. |
Nordentoft M |
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Nordentoft |
Merete |
M |
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Mental Health Services in the Capital Region of Denmark, Mental Health Center Copenhagen, University of Copenhagen, Copenhagen, Denmark. |
Pejovic-Milovancevic M |
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Pejovic-Milovancevic |
Milica |
M |
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Department of Psychiatry, School of Medicine, University of Belgrade, Belgrade, Serbia. |
Sigurdsson E |
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Sigurdsson |
Engilbert |
E |
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Department of Psychiatry, National University Hospital, Reykjavik, Iceland. |
Silagadze T |
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Silagadze |
Teimuraz |
T |
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Department of Psychiatry and Drug Addiction, Tbilisi State Medical University (TSMU), Tbilisi, Georgia. |
Hansen CS |
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Hansen |
Christine Søholm |
CS |
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Center for Neonatal Screening, Department for Congenital Disorders, Statens Serum Institut, Copenhagen, Denmark. |
Stefansson K |
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Stefansson |
Kari |
K |
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deCODE Genetics, Reykjavik, Iceland. |
Stefansson H |
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Stefansson |
Hreinn |
H |
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deCODE Genetics, Reykjavik, Iceland. |
Steinberg S |
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Steinberg |
Stacy |
S |
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deCODE Genetics, Reykjavik, Iceland. |
Tosato S |
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Tosato |
Sarah |
S |
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Section of Psychiatry, Department of Public Health and Community Medicine, University of Verona, Verona, Italy. |
Werge T |
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Werge |
Thomas |
T |
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Department of Clinical Medicine, University of Copenhagen, Copenhagen, Denmark. |
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GERAD1 Consortium: |
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CRESTAR Consortium: |
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Collier DA |
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Collier |
David A |
DA |
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Discovery Neuroscience Research, Eli Lilly and Company, Lilly Research Laboratories, Windlesham, UK. |
Rujescu D |
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Rujescu |
Dan |
D |
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Department of Psychiatry, University of Munich, Munich, Germany. |
Kirov G |
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Kirov |
George |
G |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. |
Owen MJ |
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Owen |
Michael J |
MJ |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. owenmj@cardiff.ac.uk. |
O'Donovan MC |
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O'Donovan |
Michael C |
MC |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. odonovanmc@cardiff.ac.uk. |
Walters JTR |
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Walters |
James T R |
JTR |
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MRC Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, UK. waltersjt@cardiff.ac.uk. |
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GERAD1 Consortium |
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CRESTAR Consortium |
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GERAD1 Consortium |
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CRESTAR Consortium |
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INVESTIGATORS |
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LASTNAME |
FORENAME |
INITIALS |
AFFILIATION |
Harold |
Denise |
D |
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Sims |
Rebecca |
R |
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Gerrish |
Amy |
A |
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Chapman |
Jade |
J |
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Escott-Price |
Valentina |
V |
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Abraham |
Richard |
R |
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Hollingworth |
Paul |
P |
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Pahwa |
Jaspreet |
J |
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Denning |
Nicola |
N |
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Thomas |
Charlene |
C |
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Taylor |
Sarah |
S |
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Powell |
John |
J |
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Proitsi |
Petroula |
P |
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Lupton |
Michelle |
M |
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Lovestone |
Simon |
S |
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Passmore |
Peter |
P |
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Craig |
David |
D |
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McGuinness |
Bernadette |
B |
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Johnston |
Janet |
J |
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Todd |
Stephen |
S |
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Maier |
Wolfgang |
W |
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Jessen |
Frank |
F |
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Heun |
Reiner |
R |
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Schurmann |
Britta |
B |
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Ramirez |
Alfredo |
A |
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Becker |
Tim |
T |
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Herold |
Christine |
C |
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Lacour |
André |
A |
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Drichel |
Dmitriy |
D |
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Nothen |
Markus |
M |
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Goate |
Alison |
A |
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Cruchaga |
Carlos |
C |
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Nowotny |
Petra |
P |
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Morris |
John C |
JC |
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Mayo |
Kevin |
K |
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Holmans |
Peter |
P |
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O'Donovan |
Michael |
M |
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Owen |
Michael |
M |
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Williams |
Julie |
J |
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Achilla |
Evanthia |
E |
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Agerbo |
Esben |
E |
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Barr |
Cathy L |
CL |
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Böttger |
Theresa Wimberly |
TW |
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Breen |
Gerome |
G |
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Cohen |
Dan |
D |
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Collier |
David A |
DA |
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Curran |
Sarah |
S |
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Dempster |
Emma |
E |
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Dima |
Danai |
D |
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Sabes-Figuera |
Ramon |
R |
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Flanagan |
Robert J |
RJ |
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Frangou |
Sophia |
S |
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Frank |
Josef |
J |
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Gasse |
Christiane |
C |
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Gaughran |
Fiona |
F |
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Giegling |
Ina |
I |
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Grove |
Jakob |
J |
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Hannon |
Eilis |
E |
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Hartmann |
Annette M |
AM |
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Heißerer |
Barbara |
B |
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Helthuis |
Marinka |
M |
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Horsdal |
Henriette Thisted |
HT |
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Ingimarsson |
Oddur |
O |
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Jollie |
Karel |
K |
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Kennedy |
James L |
JL |
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Köhler |
Ole |
O |
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Konte |
Bettina |
B |
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Lang |
Maren |
M |
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Legge |
Sophie E |
SE |
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Lewis |
Cathryn |
C |
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MacCabe |
James |
J |
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Malhotra |
Anil K |
AK |
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McCrone |
Paul |
P |
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Meier |
Sandra M |
SM |
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Mill |
Jonathan |
J |
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Mors |
Ole |
O |
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Mortensen |
Preben Bo |
PB |
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Nöthen |
Markus M |
MM |
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O'Donovan |
Michael C |
MC |
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Owen |
Michael J |
MJ |
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Pardiñas |
Antonio F |
AF |
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Pedersen |
Carsten B |
CB |
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Rietschel |
Marcella |
M |
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Rujescu |
Dan |
D |
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Schwalber |
Ameli |
A |
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Sigurdsson |
Engilbert |
E |
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Sørensen |
Holger J |
HJ |
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Spencer |
Benjamin |
B |
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Stefansson |
Hreinn |
H |
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Støvring |
Henrik |
H |
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Strohmaier |
Jana |
J |
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Sullivan |
Patrick |
P |
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Vassos |
Evangelos |
E |
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Verbelen |
Moira |
M |
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Walters |
James T R |
JTR |
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Werge |
Thomas |
T |
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JOURNAL |
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VOLUME: |
ISSUE: |
TITLE: Nature genetics |
ISOABBREVIATION: Nat. Genet. |
YEAR: 2018 |
MONTH: Feb |
DAY: 26 |
MEDLINEDATE: |
SEASON: |
CITEDMEDIUM: Internet |
ISSN: 1546-1718 |
ISSNTYPE: Electronic |
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MEDLINE JOURNAL |
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MEDLINETA: Nat Genet |
COUNTRY: United States |
ISSNLINKING: 1061-4036 |
NLMUNIQUEID: 9216904 |
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Journal Article |
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