|
PMID |
|
|
TITLE |
|
An Analysis of Two Genome-wide Association Meta-analyses Identifies a New Locus for Broad Depression Phenotype. |
|
ABSTRACT |
|
BACKGROUND |
NlmCategory: BACKGROUND |
The genetics of depression has been explored in genome-wide association studies that focused on either major depressive disorder or depressive symptoms with mostly negative findings. A broad depression phenotype including both phenotypes has not been tested previously using a genome-wide association approach. We aimed to identify genetic polymorphisms significantly associated with a broad phenotype from depressive symptoms to major depressive disorder. |
METHODS |
NlmCategory: METHODS |
We analyzed two prior studies of 70,017 participants of European ancestry from general and clinical populations in the discovery stage. We performed a replication meta-analysis of 28,328 participants. Single nucleotide polymorphism (SNP)-based heritability and genetic correlations were calculated using linkage disequilibrium score regression. Discovery and replication analyses were performed using a p-value-based meta-analysis. Lifetime major depressive disorder and depressive symptom scores were used as the outcome measures. |
RESULTS |
NlmCategory: RESULTS |
The SNP-based heritability of major depressive disorder was 0.21 (SE = 0.02), the SNP-based heritability of depressive symptoms was 0.04 (SE = 0.01), and their genetic correlation was 1.001 (SE = 0.2). We found one genome-wide significant locus related to the broad depression phenotype (rs9825823, chromosome 3: 61,082,153, p = 8.2 × 10(-9)) located in an intron of the FHIT gene. We replicated this SNP in independent samples (p = .02) and the overall meta-analysis of the discovery and replication cohorts (1.0 × 10(-9)). |
CONCLUSIONS |
NlmCategory: CONCLUSIONS |
This large study identified a new locus for depression. Our results support a continuum between depressive symptoms and major depressive disorder. A phenotypically more inclusive approach may help to achieve the large sample sizes needed to detect susceptibility loci for depression. |
Copyright © 2016 Society of Biological Psychiatry. Published by Elsevier Inc. All rights reserved. |
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DATE PUBLISHED |
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HISTORY |
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PUBSTATUS |
PUBSTATUSDATE |
received |
2016/08/03 |
revised |
2016/11/11 |
accepted |
2016/11/22 |
entrez |
2017/01/05 06:00 |
pubmed |
2017/01/05 06:00 |
medline |
2017/01/05 06:00 |
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AUTHORS |
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NAME |
COLLECTIVENAME |
LASTNAME |
FORENAME |
INITIALS |
AFFILIATION |
AFFILIATIONINFO |
Direk N |
|
Direk |
Nese |
N |
|
Department of Epidemiology, Erasmus University Medical Center, Rotterdam; Department of Psychiatry, Dokuz Eylul University, Izmir, Turkey. |
Williams S |
|
Williams |
Stephanie |
S |
|
Department of Genetics, Genomic Medicine, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina. |
Smith JA |
|
Smith |
Jennifer A |
JA |
|
Department of Epidemiology, University of Michigan, Ann Arbor, Michigan. |
Ripke S |
|
Ripke |
Stephan |
S |
|
Stanley Center for Psychiatric Research, The Broad Institute of Harvard and MIT, Cambridge; Analytic and Translational Genetics Unit, Massachusetts General Hospital and Harvard Medical School, Boston; Department of Psychiatry and Psychotherapy, Charité, Campus Mitte, Berlin. |
Air T |
|
Air |
Tracy |
T |
|
Discipline of Psychiatry, School of Medicine, University of Adelaide, Adelaide, South Australia. |
Amare AT |
|
Amare |
Azmeraw T |
AT |
|
Department of Epidemiology, University Medical Center Groningen, University of Groningen, Groningen; Discipline of Psychiatry, School of Medicine, University of Adelaide, Adelaide, South Australia. |
Amin N |
|
Amin |
Najaf |
N |
|
Genetic Epidemiology Unit, Erasmus University Medical Center, Rotterdam. |
Baune BT |
|
Baune |
Bernhard T |
BT |
|
Discipline of Psychiatry, School of Medicine, University of Adelaide, Adelaide, South Australia. |
Bennett DA |
|
Bennett |
David A |
DA |
|
Rush Alzheimer's Disease Center & Department of Neurological Sciences, Rush University Medical Center, Chicago, Illinois. |
Blackwood DH |
|
Blackwood |
Douglas H R |
DH |
|
Division of Psychiatry, University of Edinburgh, Edinburgh. |
Boomsma D |
|
Boomsma |
Dorret |
D |
|
Department of Biological Psychology, VU University, Amsterdam, The Netherlands. |
Breen G |
|
Breen |
Gerome |
G |
|
MRC Social, Genetic & Developmental Psychiatry Centre Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London, London. |
Buttenschøn HN |
|
Buttenschøn |
Henriette N |
HN |
|
Translational Neuropsychiatry Unit, Department of Clinical Medicine, Aarhus; The Lundbeck Foundation Initiative for Integrative Psychiatric Research, Aarhus. |
Byrne EM |
|
Byrne |
Enda M |
EM |
|
Queensland Brain Institute, University of Queensland, St. Lucia, Queensland. |
Børglum AD |
|
Børglum |
Anders D |
AD |
|
Department of Biomedicine and Centre for Integrative Sequencing, Aarhus University, Aarhus; The Lundbeck Foundation Initiative for Integrative Psychiatric Research, Aarhus. |
Castelao E |
|
Castelao |
Enrique |
E |
|
Department of Psychiatry, Lausanne University Hospital, Lausanne. |
Cichon S |
|
Cichon |
Sven |
S |
|
Institute of Human Genetics, University of Bonn, Bonn; Department of Genomics, Life & Brain Center, Bonn; Institute of Neuroscience and Medicine, Research Centre Jülich, Jülich; Division of Medical Genetics, Department of Biomedicine, University of Basel, Basel, Switzerland. |
Clarke TK |
|
Clarke |
Toni-Kim |
TK |
|
Division of Psychiatry, University of Edinburgh, Edinburgh. |
Cornelis MC |
|
Cornelis |
Marilyn C |
MC |
|
Department of Preventive Medicine, Northwestern University Feinberg School of Medicine, Chicago, Illinois. |
Dannlowski U |
|
Dannlowski |
Udo |
U |
|
Department of Psychiatry and Psychotherapy, University of Münster, Münster. |
De Jager PL |
|
De Jager |
Philip L |
PL |
|
Program in Medical and Population Genetics, The Broad Institute of Harvard and MIT, Cambridge; Department of Neurology, Program in Translational NeuroPsychiatric Genomics, Brigham and Women's Hospital, Harvard Medical School, Boston; Department of Neurology, Harvard Medical School, Boston. |
Demirkan A |
|
Demirkan |
Ayse |
A |
|
Genetic Epidemiology Unit, Erasmus University Medical Center, Rotterdam. |
Domenici E |
|
Domenici |
Enrico |
E |
|
Roche Pharmaceutical Research and Early Development, Neuroscience, Ophthalmology and Rare Diseases Discovery & Translational Medicine Area, Roche Innovation Center Basel, F Hoffman-La Roche Ltd., Basel, Switzerland; Centre for Integrative Biology, University of Trento, Trento, Italy. |
van Duijn CM |
|
van Duijn |
Cornelia M |
CM |
|
Genetic Epidemiology Unit, Erasmus University Medical Center, Rotterdam. |
Dunn EC |
|
Dunn |
Erin C |
EC |
|
Stanley Center for Psychiatric Research, The Broad Institute of Harvard and MIT, Cambridge; Psychiatric and Neurodevelopmental Genetics Unit, Center for Human Genetic Research, Massachusetts General Hospital, Boston; Department of Psychiatry, Harvard Medical School, Boston. |
Eriksson JG |
|
Eriksson |
Johan G |
JG |
|
National Institute for Health and Welfare, Department of Chronic Disease Prevention, Helsinki; Department of General Practice and Primary Health Care, University of Helsinki, Helsinki; Unit of General Practice, Helsinki University Central Hospital, Helsinki; Folkhalsan Research Centre, Helsinki; Vasa Central Hospital, Vasa, Finland. |
Esko T |
|
Esko |
Tonu |
T |
|
Program in Medical and Populational Genetics, The Broad Institute of Harvard and MIT, Cambridge; Division of Endocrinology, Boston Children's Hospital, Cambridge; Department of Genetics, Harvard Medical School, Boston; Estonian Genome Center, University of Tartu, Tartu, Estonia. |
Faul JD |
|
Faul |
Jessica D |
JD |
|
Institute for Social Research, University of Michigan, Ann Arbor, Michigan. |
Ferrucci L |
|
Ferrucci |
Luigi |
L |
|
Translational Gerontology Branch, National Institute on Aging, Baltimore, Maryland. |
Fornage M |
|
Fornage |
Myriam |
M |
|
Brown Foundation Institute of Molecular Medicine, University of Texas Health Science Center at Houston, Houston, Texas. |
de Geus E |
|
de Geus |
Eco |
E |
|
Department of Biological Psychology, VU University, Amsterdam, The Netherlands. |
Gill M |
|
Gill |
Michael |
M |
|
Department of Psychiatry, Trinity Centre for Health Science, Dublin, Ireland. |
Gordon SD |
|
Gordon |
Scott D |
SD |
|
QIMR Berghofer Medical Research Institute, Brisbane. |
Grabe HJ |
|
Grabe |
Hans Jörgen |
HJ |
|
Department of Psychiatry and Psychotherapy, Helios Hospital Stralsund, Munich; Department of Psychiatry and Psychotherapy, University Medicine Greifswald, Munich; German Center for Neurodegenerative Diseases, Site Rostock/Greifswald, Munich. |
van Grootheest G |
|
van Grootheest |
Gerard |
G |
|
Department of Psychiatry, Neuroscience Campus Amsterdam and EMGO Institute of Health and Care Research, VU University, Amsterdam, The Netherlands. |
Hamilton SP |
|
Hamilton |
Steven P |
SP |
|
Department of Psychiatry, Kaiser Permanente San Francisco Medical Center, San Francisco. |
Hartman CA |
|
Hartman |
Catharina A |
CA |
|
Department of Psychiatry, University Medical Center Groningen, University of Groningen, Groningen. |
Heath AC |
|
Heath |
Andrew C |
AC |
|
Department of Psychiatry, Washington University, St. Louis, Missouri. |
Hek K |
|
Hek |
Karin |
K |
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Department of Epidemiology, Erasmus University Medical Center, Rotterdam; Department of Psychiatry, Erasmus University Medical Center, Rotterdam. |
Hofman A |
|
Hofman |
Albert |
A |
|
Department of Epidemiology, Erasmus University Medical Center, Rotterdam. |
Homuth G |
|
Homuth |
Georg |
G |
|
Interfaculty Institute for Genetics and Functional Genomics, University of Greifswald, Munich. |
Horn C |
|
Horn |
Carsten |
C |
|
Roche Pharmaceutical Research and Early Development, Neuroscience, Ophthalmology and Rare Diseases Discovery & Translational Medicine Area, Roche Innovation Center Basel, F Hoffman-La Roche Ltd., Basel, Switzerland. |
Jan Hottenga J |
|
Jan Hottenga |
Jouke |
J |
|
Department of Biological Psychology, VU University, Amsterdam, The Netherlands. |
Kardia SL |
|
Kardia |
Sharon L R |
SL |
|
Department of Epidemiology, University of Michigan, Ann Arbor, Michigan. |
Kloiber S |
|
Kloiber |
Stefan |
S |
|
Max Planck Institute of Psychiatry, Munich. |
Koenen K |
|
Koenen |
Karestan |
K |
|
Department of Epidemiology, Mailman School of Public Health, Columbia University, New York, New York. |
Kutalik Z |
|
Kutalik |
Zoltán |
Z |
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Institute of Social and Preventive Medicine, Centre Hospitalier Universitaire Vaudois, Lausanne. |
Ladwig KH |
|
Ladwig |
Karl-Heinz |
KH |
|
Department of Psychosomatic Medicine and Psychotherapy, Klinikum rechts der Isar, Technische Universität München, Munich; Institute of Epidemiology II, Mental Health Research Unit, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg. |
Lahti J |
|
Lahti |
Jari |
J |
|
Folkhalsan Research Centre, Helsinki; Institute of Behavioural Sciences, University of Helsinki, Helsinki. |
Levinson DF |
|
Levinson |
Douglas F |
DF |
|
Department of Psychiatry and Behavioral Sciences, Stanford University, Stanford, California. |
Lewis CM |
|
Lewis |
Cathryn M |
CM |
|
MRC Social, Genetic & Developmental Psychiatry Centre Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London, London. |
Lewis G |
|
Lewis |
Glyn |
G |
|
Division of Psychiatry, University College London, London. |
Li QS |
|
Li |
Qingqin S |
QS |
|
Janssen Research & Development LLC, New Brunswick, New Jersey. |
Llewellyn DJ |
|
Llewellyn |
David J |
DJ |
|
University of Exeter Medical School, Exeter. |
Lucae S |
|
Lucae |
Susanne |
S |
|
Max Planck Institute of Psychiatry, Munich. |
Lunetta KL |
|
Lunetta |
Kathryn L |
KL |
|
Department of Biostatistics, Boston University School of Public Health, Framingham, Massachusetts; Boston University and National Heart, Lung, and Blood Institute's Framingham Heart Study, Framingham, Massachusetts. |
MacIntyre DJ |
|
MacIntyre |
Donald J |
DJ |
|
Division of Psychiatry, University of Edinburgh, Edinburgh. |
Madden P |
|
Madden |
Pamela |
P |
|
Department of Psychiatry, Washington University, St. Louis, Missouri. |
Martin NG |
|
Martin |
Nicholas G |
NG |
|
QIMR Berghofer Medical Research Institute, Brisbane. |
McIntosh AM |
|
McIntosh |
Andrew M |
AM |
|
Division of Psychiatry, University of Edinburgh, Edinburgh. |
Metspalu A |
|
Metspalu |
Andres |
A |
|
Estonian Genome Center, University of Tartu, Tartu, Estonia; Institute of Molecular and Cell Biology, University of Tartu, Tartu, Estonia. |
Milaneschi Y |
|
Milaneschi |
Yuri |
Y |
|
Department of Psychiatry, Neuroscience Campus Amsterdam and EMGO Institute of Health and Care Research, VU University, Amsterdam, The Netherlands. |
Montgomery GW |
|
Montgomery |
Grant W |
GW |
|
QIMR Berghofer Medical Research Institute, Brisbane. |
Mors O |
|
Mors |
Ole |
O |
|
The Lundbeck Foundation Initiative for Integrative Psychiatric Research, Aarhus; Research Department P, Aarhus University Hospital, Risskov, Denmark. |
Mosley TH Jr |
|
Mosley |
Thomas H |
TH |
|
Department of Medicine, University of Mississippi Medical Center, Jackson, Mississippi. |
Murabito JM |
|
Murabito |
Joanne M |
JM |
|
Department of Medicine, Section of General Internal Medicine, Boston University School of Medicine, Boston; Boston University and National Heart, Lung, and Blood Institute's Framingham Heart Study, Framingham, Massachusetts. |
Müller-Myhsok B |
|
Müller-Myhsok |
Bertram |
B |
|
Max Planck Institute of Psychiatry, Munich; Munich Cluster for Systems Neurology, Munich; University of Liverpool, Institute of Translational Medicine, Liverpool. |
Nöthen MM |
|
Nöthen |
Markus M |
MM |
|
Institute of Human Genetics, University of Bonn, Bonn; Department of Genomics, Life & Brain Center, Bonn. |
Nyholt DR |
|
Nyholt |
Dale R |
DR |
|
QIMR Berghofer Medical Research Institute, Brisbane; Institute of Health and Biomedical Innovation, Queensland University of Technology, Brisbane, Queensland. |
O'Donovan MC |
|
O'Donovan |
Michael C |
MC |
|
MRC Centre for Neuropsychiatric Genetics and Genomics, Institute of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, United Kingdom. |
Penninx BW |
|
Penninx |
Brenda W |
BW |
|
Department of Psychiatry, Neuroscience Campus Amsterdam and EMGO Institute of Health and Care Research, VU University, Amsterdam, The Netherlands. |
Pergadia ML |
|
Pergadia |
Michele L |
ML |
|
Department of Psychiatry, Washington University, St. Louis, Missouri; Charles E. Schmidt College of Medicine, Florida Atlantic University, Boca Raton, Florida. |
Perlis R |
|
Perlis |
Roy |
R |
|
Center for Experimental Drugs and Diagnostics, Massachusetts General Hospital and Harvard Medical School, Boston. |
Potash JB |
|
Potash |
James B |
JB |
|
Department of Psychiatry, University of Iowa Carver College of Medicine, Iowa City, Iowa. |
Preisig M |
|
Preisig |
Martin |
M |
|
Department of Psychiatry, Lausanne University Hospital, Lausanne. |
Purcell SM |
|
Purcell |
Shaun M |
SM |
|
Division of Psychiatric Genomics, Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, New York. |
Quiroz JA |
|
Quiroz |
Jorge A |
JA |
|
Solid GT, Boston; Roche Pharmaceutical Research and Early Development, Neuroscience, Ophthalmology and Rare Diseases Discovery & Translational Medicine Area, Roche Innovation Center Basel, F Hoffman-La Roche Ltd., Basel, Switzerland. |
Räikkönen K |
|
Räikkönen |
Katri |
K |
|
Institute of Behavioural Sciences, University of Helsinki, Helsinki. |
Rice JP |
|
Rice |
John P |
JP |
|
Department of Psychiatry, Washington University, St. Louis, Missouri. |
Rietschel M |
|
Rietschel |
Marcella |
M |
|
Department of Genetic Epidemiology in Psychiatry, Central Institute of Mental Health, Medical Faculty Mannheim/Heidelberg University, Mannheim. |
Rivera M |
|
Rivera |
Margarita |
M |
|
MRC Social, Genetic & Developmental Psychiatry Centre Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London, London; CIBERSAM-Universidad de Granada, Hospitales Universitarios de Granada/Universidad de Granada, Granada, Spain; Instituto de Investigación Biosanitaria ibs.GRANADA, Hospitales Universitarios de Granada/Universidad de Granada, Granada, Spain. |
Schulze TG |
|
Schulze |
Thomas G |
TG |
|
Institute of Psychiatric Phenomics and Genomics, Ludwig-Maximilians-University, Munich; Department of Psychiatry and Psychotherapy, University of Göttingen, Göttingen, Germany. |
Shi J |
|
Shi |
Jianxin |
J |
|
Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Bethesda, Maryland. |
Shyn S |
|
Shyn |
Stanley |
S |
|
Group Health, Seattle, Washington. |
Sinnamon GC |
|
Sinnamon |
Grant C |
GC |
|
Department of Psychiatry and Psychiatric Neuroscience, School of Medicine and Dentistry, James Cook University, Townsville, Queensland, Australia. |
Smit JH |
|
Smit |
Johannes H |
JH |
|
Department of Psychiatry, Neuroscience Campus Amsterdam and EMGO Institute of Health and Care Research, VU University, Amsterdam, The Netherlands. |
Smoller JW |
|
Smoller |
Jordan W |
JW |
|
Stanley Center for Psychiatric Research, The Broad Institute of Harvard and MIT, Cambridge; Psychiatric and Neurodevelopmental Genetics Unit, Center for Human Genetic Research, Massachusetts General Hospital, Boston; Department of Psychiatry, Harvard Medical School, Boston. |
Snieder H |
|
Snieder |
Harold |
H |
|
Unit of Genetic Epidemiology & Bioinformatics, University Medical Center Groningen, University of Groningen, Groningen. |
Tanaka T |
|
Tanaka |
Toshiko |
T |
|
Translational Gerontology Branch, National Institute on Aging, Baltimore, Maryland. |
Tansey KE |
|
Tansey |
Katherine E |
KE |
|
MRC Centre for Neuropsychiatric Genetics and Genomics, Institute of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff University, Cardiff, United Kingdom. |
Teumer A |
|
Teumer |
Alexander |
A |
|
Institute for Community Medicine, University Medicine Greifswald, Greifswald, Munich. |
Uher R |
|
Uher |
Rudolf |
R |
|
MRC Social, Genetic & Developmental Psychiatry Centre Centre, Institute of Psychiatry, Psychology & Neuroscience, King's College London, London; Dalhousie University, Halifax, Nova Scotia, Canada. |
Umbricht D |
|
Umbricht |
Daniel |
D |
|
Roche Pharmaceutical Research and Early Development, Neuroscience, Ophthalmology and Rare Diseases Discovery & Translational Medicine Area, Roche Innovation Center Basel, F Hoffman-La Roche Ltd., Basel, Switzerland. |
Van der Auwera S |
|
Van der Auwera |
Sandra |
S |
|
Department of Psychiatry and Psychotherapy, University Medicine Greifswald, Munich; German Center for Neurodegenerative Diseases, Site Rostock/Greifswald, Munich. |
Ware EB |
|
Ware |
Erin B |
EB |
|
Department of Epidemiology, University of Michigan, Ann Arbor, Michigan; Institute for Social Research, University of Michigan, Ann Arbor, Michigan. |
Weir DR |
|
Weir |
David R |
DR |
|
Institute for Social Research, University of Michigan, Ann Arbor, Michigan. |
Weissman MM |
|
Weissman |
Myrna M |
MM |
|
College of Physicians and Surgeons, Columbia University and New York State Psychiatric Institute, New York, New York. |
Willemsen G |
|
Willemsen |
Gonneke |
G |
|
Department of Biological Psychology, VU University, Amsterdam, The Netherlands. |
Yang J |
|
Yang |
Jingyun |
J |
|
Rush Alzheimer's Disease Center & Department of Neurological Sciences, Rush University Medical Center, Chicago, Illinois. |
Zhao W |
|
Zhao |
Wei |
W |
|
Department of Epidemiology, University of Michigan, Ann Arbor, Michigan. |
Tiemeier H |
|
Tiemeier |
Henning |
H |
|
Department of Epidemiology, Erasmus University Medical Center, Rotterdam; Department of Psychiatry, Erasmus University Medical Center, Rotterdam. Electronic address: h.tiemeier@erasmusmc.nl. |
Sullivan PF |
|
Sullivan |
Patrick F |
PF |
|
Department of Psychiatry, Genomic Medicine, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina; Center for Psychiatric Genomics, Genomic Medicine, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina; Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Sweden. |
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INVESTIGATORS |
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JOURNAL |
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VOLUME: |
ISSUE: |
TITLE: Biological psychiatry |
ISOABBREVIATION: Biol. Psychiatry |
YEAR: 2016 |
MONTH: Dec |
DAY: 08 |
MEDLINEDATE: |
SEASON: |
CITEDMEDIUM: Internet |
ISSN: 1873-2402 |
ISSNTYPE: Electronic |
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MEDLINE JOURNAL |
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MEDLINETA: Biol Psychiatry |
COUNTRY: United States |
ISSNLINKING: 0006-3223 |
NLMUNIQUEID: 0213264 |
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PUBLICATION TYPE |
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PUBLICATIONTYPE TEXT |
Journal Article |
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COMMENTS AND CORRECTIONS |
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GRANTS |
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GRANTID |
AGENCY |
COUNTRY |
R01 MH077139 |
NIMH NIH HHS |
United States |
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GENERAL NOTE |
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KEYWORDS |
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KEYWORD |
CHARGE consortium |
Depressive symptoms |
FHIT gene |
Genome-wide association study |
Major depressive disorder |
Psychiatric Genomics Consortium |
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MESH HEADINGS |
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SUPPLEMENTARY MESH |
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GENE SYMBOLS |
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CHEMICALS |
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OTHER ID's |
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