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PMID |
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TITLE |
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Five endometrial cancer risk loci identified through genome-wide association analysis. |
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ABSTRACT |
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NlmCategory: UNASSIGNED |
We conducted a meta-analysis of three endometrial cancer genome-wide association studies (GWAS) and two follow-up phases totaling 7,737 endometrial cancer cases and 37,144 controls of European ancestry. Genome-wide imputation and meta-analysis identified five new risk loci of genome-wide significance at likely regulatory regions on chromosomes 13q22.1 (rs11841589, near KLF5), 6q22.31 (rs13328298, in LOC643623 and near HEY2 and NCOA7), 8q24.21 (rs4733613, telomeric to MYC), 15q15.1 (rs937213, in EIF2AK4, near BMF) and 14q32.33 (rs2498796, in AKT1, near SIVA1). We also found a second independent 8q24.21 signal (rs17232730). Functional studies of the 13q22.1 locus showed that rs9600103 (pairwise r(2) = 0.98 with rs11841589) is located in a region of active chromatin that interacts with the KLF5 promoter region. The rs9600103[T] allele that is protective in endometrial cancer suppressed gene expression in vitro, suggesting that regulation of the expression of KLF5, a gene linked to uterine development, is implicated in tumorigenesis. These findings provide enhanced insight into the genetic and biological basis of endometrial cancer. |
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DATE PUBLISHED |
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HISTORY |
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PUBSTATUS |
PUBSTATUSDATE |
received |
2015/08/26 |
accepted |
2016/04/08 |
entrez |
2016/05/03 06:00 |
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AUTHORS |
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NAME |
COLLECTIVENAME |
LASTNAME |
FORENAME |
INITIALS |
AFFILIATION |
AFFILIATIONINFO |
Cheng TH |
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Cheng |
Timothy H T |
TH |
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Oxford Centre for Cancer Gene Research, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK. |
Thompson DJ |
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Thompson |
Deborah J |
DJ |
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Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK. |
O'Mara TA |
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O'Mara |
Tracy A |
TA |
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Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia. |
Painter JN |
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Painter |
Jodie N |
JN |
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Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia. |
Glubb DM |
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Glubb |
Dylan M |
DM |
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Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia. |
Flach S |
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Flach |
Susanne |
S |
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Oxford Centre for Cancer Gene Research, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK. |
Lewis A |
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Lewis |
Annabelle |
A |
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Oxford Centre for Cancer Gene Research, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK. |
French JD |
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French |
Juliet D |
JD |
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Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia. |
Freeman-Mills L |
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Freeman-Mills |
Luke |
L |
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Oxford Centre for Cancer Gene Research, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK. |
Church D |
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Church |
David |
D |
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Oxford Centre for Cancer Gene Research, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK. |
Gorman M |
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Gorman |
Maggie |
M |
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Oxford Centre for Cancer Gene Research, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK. |
Martin L |
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Martin |
Lynn |
L |
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Oxford Centre for Cancer Gene Research, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK. |
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National Study of Endometrial Cancer Genetics Group (NSECG) |
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Hodgson S |
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Hodgson |
Shirley |
S |
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Department of Clinical Genetics, St George's, University of London, London, UK. |
Webb PM |
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Webb |
Penelope M |
PM |
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Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia. |
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Australian National Endometrial Cancer Study Group (ANECS) |
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Attia J |
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Attia |
John |
J |
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Centre for Clinical Epidemiology and Biostatistics, School of Medicine and Public Health, University of Newcastle, Newcastle, New South Wales, Australia. |
Holliday EG |
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Holliday |
Elizabeth G |
EG |
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Centre for Clinical Epidemiology and Biostatistics, School of Medicine and Public Health, University of Newcastle, Newcastle, New South Wales, Australia. |
McEvoy M |
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McEvoy |
Mark |
M |
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Centre for Clinical Epidemiology and Biostatistics, School of Medicine and Public Health, University of Newcastle, Newcastle, New South Wales, Australia. |
Scott RJ |
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Scott |
Rodney J |
RJ |
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School of Biomedical Sciences and Pharmacy, University of Newcastle, Newcastle, New South Wales, Australia. |
Henders AK |
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Henders |
Anjali K |
AK |
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Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia. |
Martin NG |
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Martin |
Nicholas G |
NG |
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Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia. |
Montgomery GW |
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Montgomery |
Grant W |
GW |
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Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia. |
Nyholt DR |
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Nyholt |
Dale R |
DR |
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Institute of Health and Biomedical Innovation, Queensland University of Technology, Brisbane, Queensland, Australia. |
Ahmed S |
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Ahmed |
Shahana |
S |
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Centre for Cancer Genetic Epidemiology, Department of Oncology, University of Cambridge, Cambridge, UK. |
Healey CS |
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Healey |
Catherine S |
CS |
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Centre for Cancer Genetic Epidemiology, Department of Oncology, University of Cambridge, Cambridge, UK. |
Shah M |
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Shah |
Mitul |
M |
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Centre for Cancer Genetic Epidemiology, Department of Oncology, University of Cambridge, Cambridge, UK. |
Dennis J |
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Dennis |
Joe |
J |
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Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK. |
Fasching PA |
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Fasching |
Peter A |
PA |
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Department of Gynecology and Obstetrics, University Hospital Erlangen, Friedrich Alexander University Erlangen-Nuremberg, Erlangen, Germany. |
Beckmann MW |
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Beckmann |
Matthias W |
MW |
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Department of Gynecology and Obstetrics, University Hospital Erlangen, Friedrich Alexander University Erlangen-Nuremberg, Erlangen, Germany. |
Hein A |
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Hein |
Alexander |
A |
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Department of Gynecology and Obstetrics, University Hospital Erlangen, Friedrich Alexander University Erlangen-Nuremberg, Erlangen, Germany. |
Ekici AB |
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Ekici |
Arif B |
AB |
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Institute of Human Genetics, University Hospital Erlangen, Friedrich Alexander University Erlangen-Nuremberg, Erlangen, Germany. |
Hall P |
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Hall |
Per |
P |
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Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden. |
Czene K |
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Czene |
Kamila |
K |
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Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden. |
Darabi H |
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Darabi |
Hatef |
H |
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Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden. |
Li J |
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Li |
Jingmei |
J |
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Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden. |
Dörk T |
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Dörk |
Thilo |
T |
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Gynaecology Research Unit, Hannover Medical School, Hannover, Germany. |
Dürst M |
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Dürst |
Matthias |
M |
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Department of Gynaecology, Jena University Hospital, Friedrich Schiller University, Jena, Germany. |
Hillemanns P |
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Hillemanns |
Peter |
P |
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Clinics of Gynaecology and Obstetrics, Hannover Medical School, Hannover, Germany. |
Runnebaum I |
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Runnebaum |
Ingo |
I |
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Department of Gynaecology, Jena University Hospital, Friedrich Schiller University, Jena, Germany. |
Amant F |
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Amant |
Frederic |
F |
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Division of Gynecologic Oncology, Department of Obstetrics and Gynecology, University Hospitals, KU Leuven, University of Leuven, Leuven, Belgium. |
Schrauwen S |
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Schrauwen |
Stefanie |
S |
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Division of Gynecologic Oncology, Department of Obstetrics and Gynecology, University Hospitals, KU Leuven, University of Leuven, Leuven, Belgium. |
Zhao H |
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Zhao |
Hui |
H |
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Laboratory for Translational Genetics, Department of Oncology, University Hospitals Leuven, Leuven, Belgium. |
Lambrechts D |
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Lambrechts |
Diether |
D |
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Laboratory for Translational Genetics, Department of Oncology, University Hospitals Leuven, Leuven, Belgium. |
Depreeuw J |
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Depreeuw |
Jeroen |
J |
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Laboratory for Translational Genetics, Department of Oncology, University Hospitals Leuven, Leuven, Belgium. |
Dowdy SC |
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Dowdy |
Sean C |
SC |
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Division of Gynecologic Oncology, Department of Obstetrics and Gynecology, Mayo Clinic, Rochester, Minnesota, USA. |
Goode EL |
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Goode |
Ellen L |
EL |
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Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota, USA. |
Fridley BL |
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Fridley |
Brooke L |
BL |
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Department of Biostatistics, University of Kansas Medical Center, Kansas City, Kansas, USA. |
Winham SJ |
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Winham |
Stacey J |
SJ |
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Department of Health Sciences Research, Mayo Clinic, Rochester, Minnesota, USA. |
Njølstad TS |
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Njølstad |
Tormund S |
TS |
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Department of Obstetrics and Gynecology, Haukeland University Hospital, Bergen, Norway. |
Salvesen HB |
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Salvesen |
Helga B |
HB |
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Department of Obstetrics and Gynecology, Haukeland University Hospital, Bergen, Norway. |
Trovik J |
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Trovik |
Jone |
J |
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Department of Obstetrics and Gynecology, Haukeland University Hospital, Bergen, Norway. |
Werner HM |
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Werner |
Henrica M J |
HM |
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Department of Obstetrics and Gynecology, Haukeland University Hospital, Bergen, Norway. |
Ashton K |
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Ashton |
Katie |
K |
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School of Biomedical Sciences and Pharmacy, University of Newcastle, Newcastle, New South Wales, Australia. |
Otton G |
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Otton |
Geoffrey |
G |
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School of Medicine and Public Health, University of Newcastle, Newcastle, New South Wales, Australia. |
Proietto T |
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Proietto |
Tony |
T |
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School of Medicine and Public Health, University of Newcastle, Newcastle, New South Wales, Australia. |
Liu T |
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Liu |
Tao |
T |
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Department of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden. |
Mints M |
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Mints |
Miriam |
M |
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Department of Women's and Children's Health, Karolinska Institutet, Karolinska University Hospital, Stockholm, Sweden. |
Tham E |
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Tham |
Emma |
E |
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Department of Clinical Genetics, Karolinska University Hospital Solna, Stockholm, Sweden. |
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RENDOCAS |
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CHIBCHA Consortium |
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Li MJ |
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Li |
Mulin Jun |
MJ |
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Centre for Genomic Sciences, Li Ka Shing Faculty of Medicine, University of Hong Kong, Hong Kong, China. |
Yip SH |
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Yip |
Shun H |
SH |
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Centre for Genomic Sciences, Li Ka Shing Faculty of Medicine, University of Hong Kong, Hong Kong, China. |
Wang J |
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Wang |
Junwen |
J |
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Department of Biomedical Informatics, Arizona State University, Scottsdale, Arizona, USA. |
Bolla MK |
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Bolla |
Manjeet K |
MK |
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Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK. |
Michailidou K |
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Michailidou |
Kyriaki |
K |
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Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK. |
Wang Q |
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Wang |
Qin |
Q |
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Centre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK. |
Tyrer JP |
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Tyrer |
Jonathan P |
JP |
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Centre for Cancer Genetic Epidemiology, Department of Oncology, University of Cambridge, Cambridge, UK. |
Dunlop M |
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Dunlop |
Malcolm |
M |
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MRC Human Genetics Unit, Western General Hospital Edinburgh, Edinburgh, UK. |
Houlston R |
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Houlston |
Richard |
R |
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Division of Genetics and Epidemiology, Institute of Cancer Research, London, UK. |
Palles C |
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Palles |
Claire |
C |
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Oxford Centre for Cancer Gene Research, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK. |
Hopper JL |
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Hopper |
John L |
JL |
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Centre for Epidemiology and Biostatistics, Melbourne School of Population and Global Health, University of Melbourne, Melbourne, Victoria, Australia. |
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AOCS Group |
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Peto J |
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Peto |
Julian |
J |
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London School of Hygiene and Tropical Medicine, London, UK. |
Swerdlow AJ |
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Swerdlow |
Anthony J |
AJ |
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Division of Breast Cancer Research, Institute of Cancer Research, London, UK. |
Burwinkel B |
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Burwinkel |
Barbara |
B |
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Molecular Epidemiology Group, German Cancer Research Center (DKFZ), Heidelberg, Germany. |
Brenner H |
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Brenner |
Hermann |
H |
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German Cancer Consortium (DKTK), German Cancer Research Center (DKFZ), Heidelberg, Germany. |
Meindl A |
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Meindl |
Alfons |
A |
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Division of Tumor Genetics, Department of Obstetrics and Gynecology, Technical University of Munich, Munich, Germany. |
Brauch H |
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Brauch |
Hiltrud |
H |
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University of Tübingen, Tübingen, Germany. |
Lindblom A |
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Lindblom |
Annika |
A |
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Department of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden. |
Chang-Claude J |
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Chang-Claude |
Jenny |
J |
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University Cancer Center Hamburg (UCCH), University Medical Center Hamburg-Eppendorf, Hamburg, Germany. |
Couch FJ |
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Couch |
Fergus J |
FJ |
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Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA. |
Giles GG |
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Giles |
Graham G |
GG |
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Department of Epidemiology and Preventive Medicine, Monash University, Melbourne, Victoria, Australia. |
Kristensen VN |
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Kristensen |
Vessela N |
VN |
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Department of Clinical Molecular Oncology, Division of Medicine, Akershus University Hospital, Lørenskog, Norway. |
Cox A |
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Cox |
Angela |
A |
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Sheffield Cancer Research, Department of Oncology, University of Sheffield, Sheffield, UK. |
Cunningham JM |
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Cunningham |
Julie M |
JM |
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Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA. |
Pharoah PD |
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Pharoah |
Paul D P |
PD |
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Centre for Cancer Genetic Epidemiology, Department of Oncology, University of Cambridge, Cambridge, UK. |
Dunning AM |
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Dunning |
Alison M |
AM |
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Centre for Cancer Genetic Epidemiology, Department of Oncology, University of Cambridge, Cambridge, UK. |
Edwards SL |
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Edwards |
Stacey L |
SL |
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Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia. |
Easton DF |
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Easton |
Douglas F |
DF |
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Centre for Cancer Genetic Epidemiology, Department of Oncology, University of Cambridge, Cambridge, UK. |
Tomlinson I |
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Tomlinson |
Ian |
I |
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Oxford Centre for Cancer Gene Research, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK. |
Spurdle AB |
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Spurdle |
Amanda B |
AB |
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Department of Genetics and Computational Biology, QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia. |
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INVESTIGATORS |
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JOURNAL |
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VOLUME: |
ISSUE: |
TITLE: Nature genetics |
ISOABBREVIATION: Nat. Genet. |
YEAR: 2016 |
MONTH: May |
DAY: 2 |
MEDLINEDATE: |
SEASON: |
CITEDMEDIUM: Internet |
ISSN: 1546-1718 |
ISSNTYPE: Electronic |
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MEDLINE JOURNAL |
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MEDLINETA: Nat Genet |
COUNTRY: United States |
ISSNLINKING: 1061-4036 |
NLMUNIQUEID: 9216904 |
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