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PMID |
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TITLE |
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Genome-wide analysis of multi-ancestry cohorts identifies new loci influencing intraocular pressure and susceptibility to glaucoma. |
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ABSTRACT |
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Elevated intraocular pressure (IOP) is an important risk factor in developing glaucoma, and variability in IOP might herald glaucomatous development or progression. We report the results of a genome-wide association study meta-analysis of 18 population cohorts from the International Glaucoma Genetics Consortium (IGGC), comprising 35,296 multi-ancestry participants for IOP. We confirm genetic association of known loci for IOP and primary open-angle glaucoma (POAG) and identify four new IOP-associated loci located on chromosome 3q25.31 within the FNDC3B gene (P = 4.19 × 10(-8) for rs6445055), two on chromosome 9 (P = 2.80 × 10(-11) for rs2472493 near ABCA1 and P = 6.39 × 10(-11) for rs8176693 within ABO) and one on chromosome 11p11.2 (best P = 1.04 × 10(-11) for rs747782). Separate meta-analyses of 4 independent POAG cohorts, totaling 4,284 cases and 95,560 controls, showed that 3 of these loci for IOP were also associated with POAG. |
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DATE PUBLISHED |
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HISTORY |
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PUBSTATUS |
PUBSTATUSDATE |
received |
2013/09/26 |
accepted |
2014/08/07 |
aheadofprint |
2014/08/31 |
entrez |
2014/09/01 06:00 |
pubmed |
2014/09/01 06:00 |
medline |
2014/12/17 06:00 |
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AUTHORS |
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NAME |
COLLECTIVENAME |
LASTNAME |
FORENAME |
INITIALS |
AFFILIATION |
AFFILIATIONINFO |
Hysi PG |
|
Hysi |
Pirro G |
PG |
|
1] Department of Twin Research and Genetic Epidemiology, King's College London, London, UK. [2]. |
Cheng CY |
|
Cheng |
Ching-Yu |
CY |
|
1] Singapore Eye Research Institute, Singapore National Eye Centre, Singapore. [2] Department of Ophthalmology, National University of Singapore and National University Health System, Singapore. [3] Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore. [4] Duke-National University of Singapore Graduate Medical School, Singapore. [5]. |
Springelkamp H |
|
Springelkamp |
Henriët |
H |
|
1] Department of Ophthalmology, Erasmus Medical Center, Rotterdam, the Netherlands. [2] Department of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands. [3]. |
Macgregor S |
|
Macgregor |
Stuart |
S |
|
1] Statistical Genetics, QIMR Berghofer Medical Research Institute Royal Brisbane Hospital, Brisbane, Queensland, Australia. [2]. |
Bailey JN |
|
Bailey |
Jessica N Cooke |
JN |
|
1] Department of Epidemiology and Biostatistics, Case Western Reserve University, Cleveland, Ohio, USA. [2]. |
Wojciechowski R |
|
Wojciechowski |
Robert |
R |
|
1] Department of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, USA. [2] National Human Genome Research Institute, US National Institutes of Health, Baltimore, Maryland, USA. [3]. |
Vitart V |
|
Vitart |
Veronique |
V |
|
Medical Research Council (MRC) Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK. |
Nag A |
|
Nag |
Abhishek |
A |
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Department of Twin Research and Genetic Epidemiology, King's College London, London, UK. |
Hewitt AW |
|
Hewitt |
Alex W |
AW |
|
Centre for Eye Research Australia, University of Melbourne, Royal Victorian Eye and Ear Hospital, Melbourne, Victoria, Australia. |
Höhn R |
|
Höhn |
René |
R |
|
Department of Ophthalmology, University Medical Center Mainz, Mainz, Germany. |
Venturini C |
|
Venturini |
Cristina |
C |
|
1] Department of Twin Research and Genetic Epidemiology, King's College London, London, UK. [2] Institute of Ophthalmology, University College London, London, UK. |
Mirshahi A |
|
Mirshahi |
Alireza |
A |
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Department of Ophthalmology, University Medical Center Mainz, Mainz, Germany. |
Ramdas WD |
|
Ramdas |
Wishal D |
WD |
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1] Department of Ophthalmology, Erasmus Medical Center, Rotterdam, the Netherlands. [2] Department of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands. |
Thorleifsson G |
|
Thorleifsson |
Gudmar |
G |
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deCODE/Amgen, Reykjavik, Iceland. |
Vithana E |
|
Vithana |
Eranga |
E |
|
1] Singapore Eye Research Institute, Singapore National Eye Centre, Singapore. [2] Department of Ophthalmology, National University of Singapore and National University Health System, Singapore. [3] Duke-National University of Singapore Graduate Medical School, Singapore. |
Khor CC |
|
Khor |
Chiea-Chuen |
CC |
|
1] Department of Ophthalmology, National University of Singapore and National University Health System, Singapore. [2] Division of Human Genetics, Genome Institute of Singapore, Singapore. |
Stefansson AB |
|
Stefansson |
Arni B |
AB |
|
Eye Clinic, Reykjavik, Iceland. |
Liao J |
|
Liao |
Jiemin |
J |
|
1] Singapore Eye Research Institute, Singapore National Eye Centre, Singapore. [2] Department of Ophthalmology, National University of Singapore and National University Health System, Singapore. |
Haines JL |
|
Haines |
Jonathan L |
JL |
|
Department of Epidemiology and Biostatistics, Case Western Reserve University, Cleveland, Ohio, USA. |
Amin N |
|
Amin |
Najaf |
N |
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Department of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands. |
Wang YX |
|
Wang |
Ya Xing |
YX |
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Beijing Institute of Ophthalmology, Beijing Tongren Hospital, Capital University of Medical Science, Beijing, China. |
Wild PS |
|
Wild |
Philipp S |
PS |
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Department of Internal Medicine II, University Medical Center Mainz, Mainz, Germany. |
Ozel AB |
|
Ozel |
Ayse B |
AB |
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Department of Human Genetics, University of Michigan, Ann Arbor, Michigan, USA. |
Li JZ |
|
Li |
Jun Z |
JZ |
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Department of Human Genetics, University of Michigan, Ann Arbor, Michigan, USA. |
Fleck BW |
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Fleck |
Brian W |
BW |
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National Health Service (NHS) Princess Alexandra Eye Pavilion, Edinburgh, UK. |
Zeller T |
|
Zeller |
Tanja |
T |
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Clinic for General and Interventional Cardiology, University Heart Center Hamburg, Hamburg, Germany. |
Staffieri SE |
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Staffieri |
Sandra E |
SE |
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Centre for Eye Research Australia, University of Melbourne, Royal Victorian Eye and Ear Hospital, Melbourne, Victoria, Australia. |
Teo YY |
|
Teo |
Yik-Ying |
YY |
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1] Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore. [2] Department of Statistics and Applied Probability, National University of Singapore, Singapore. |
Cuellar-Partida G |
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Cuellar-Partida |
Gabriel |
G |
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Statistical Genetics, QIMR Berghofer Medical Research Institute Royal Brisbane Hospital, Brisbane, Queensland, Australia. |
Luo X |
|
Luo |
Xiaoyan |
X |
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Duke Eye Center, Duke University, Durham, North Carolina, USA. |
Allingham RR |
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Allingham |
R Rand |
RR |
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Department of Ophthalmology, Duke University Medical Center, Durham, North Carolina, USA. |
Richards JE |
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Richards |
Julia E |
JE |
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Department of Ophthalmology, Erasmus Medical Center, Rotterdam, the Netherlands. |
Senft A |
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Senft |
Andrea |
A |
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Institute of Medical Biometry and Statistics, University Hospital Schleswig-Holstein, Lübeck, Germany. |
Karssen LC |
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Karssen |
Lennart C |
LC |
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Department of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands. |
Zheng Y |
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Zheng |
Yingfeng |
Y |
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1] Singapore Eye Research Institute, Singapore National Eye Centre, Singapore. [2] Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore. |
Bellenguez C |
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Bellenguez |
Céline |
C |
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1] INSERM, UMR 774, Lille, France. [2] Université Lille 2, Lille, France. [3] Institut Pasteur de Lille, Lille, France. |
Xu L |
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Xu |
Liang |
L |
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Beijing Institute of Ophthalmology, Beijing Tongren Hospital, Capital University of Medical Science, Beijing, China. |
Iglesias AI |
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Iglesias |
Adriana I |
AI |
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Department of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands. |
Wilson JF |
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Wilson |
James F |
JF |
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Centre for Population Health Sciences, University of Edinburgh Medical School, Edinburgh, UK. |
Kang JH |
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Kang |
Jae H |
JH |
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Channing Division of Network Medicine, Harvard Medical School, Boston, Massachusetts, USA. |
van Leeuwen EM |
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van Leeuwen |
Elisabeth M |
EM |
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Department of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands. |
Jonsson V |
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Jonsson |
Vesteinn |
V |
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Department of Ophthalmology, Landspitali National University Hospital, Reykjavik, Iceland. |
Thorsteinsdottir U |
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Thorsteinsdottir |
Unnur |
U |
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deCODE/Amgen, Reykjavik, Iceland. |
Despriet DD |
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Despriet |
Dominiek D G |
DD |
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Department of Ophthalmology, Erasmus Medical Center, Rotterdam, the Netherlands. |
Ennis S |
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Ennis |
Sarah |
S |
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Human Genetics and Genomic Medicine, Faulty of Medicine, University of Southampton, Southampton, UK. |
Moroi SE |
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Moroi |
Sayoko E |
SE |
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Department of Ophthalmology and Visual Sciences, University of Michigan, Ann Arbor, Michigan, USA. |
Martin NG |
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Martin |
Nicholas G |
NG |
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Genetic Epidemiology, QIMR Berghofer Medical Research Institute Royal Brisbane Hospital, Brisbane, Queensland, Australia. |
Jansonius NM |
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Jansonius |
Nomdo M |
NM |
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Department of Ophthalmology, University Medical Center Groningen, Groningen, the Netherlands. |
Yazar S |
|
Yazar |
Seyhan |
S |
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Centre for Ophthalmology and Visual Science, Lions Eye Institute, University of Western Australia, Perth, Western Australia, Australia. |
Tai ES |
|
Tai |
E-Shyong |
ES |
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1] Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore. [2] Duke-National University of Singapore Graduate Medical School, Singapore. [3] Department of Medicine, National University of Singapore and National University Health System, Singapore. |
Amouyel P |
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Amouyel |
Philippe |
P |
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1] INSERM, UMR 774, Lille, France. [2] Université Lille 2, Lille, France. [3] Institut Pasteur de Lille, Lille, France. [4] Centre Hospitalier Régional Universitaire de Lille, Lille, France. |
Kirwan J |
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Kirwan |
James |
J |
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Department of Ophthalmology, Portsmouth Hospitals NHS Trust, Portsmouth, UK. |
van Koolwijk LM |
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van Koolwijk |
Leonieke M E |
LM |
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Department of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands. |
Hauser MA |
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Hauser |
Michael A |
MA |
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1] Department of Ophthalmology, Duke University Medical Center, Durham, North Carolina, USA. [2] Department of Medicine, Duke University Medical Center, Durham, North Carolina, USA. |
Jonasson F |
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Jonasson |
Fridbert |
F |
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Faculty of Medicine, University of Iceland, Reykjavik, Iceland. |
Leo P |
|
Leo |
Paul |
P |
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The University of Queensland Diamantina Institute, Woollongabba, Queensland, Australia. |
Loomis SJ |
|
Loomis |
Stephanie J |
SJ |
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Department of Ophthalmology, Harvard Medical School and Massachusetts Eye and Ear Infirmary, Boston, Massachusetts, USA. |
Fogarty R |
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Fogarty |
Rhys |
R |
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Department of Ophthalmology, Flinders University, Adelaide, South Australia, Australia. |
Rivadeneira F |
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Rivadeneira |
Fernando |
F |
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1] Department of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands. [2] Department of Internal Medicine, Erasmus Medical Center, Rotterdam, the Netherlands. [3] Netherlands Consortium for Healthy Ageing, Netherlands Genomics Initiative, The Hague, the Netherlands. |
Kearns L |
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Kearns |
Lisa |
L |
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Centre for Eye Research Australia, University of Melbourne, Royal Victorian Eye and Ear Hospital, Melbourne, Victoria, Australia. |
Lackner KJ |
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Lackner |
Karl J |
KJ |
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Institute of Clinical Chemistry and Laboratory Medicine, Mainz, Germany. |
de Jong PT |
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de Jong |
Paulus T V M |
PT |
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1] Netherlands Institute for Neuroscience, Amsterdam, the Netherlands. [2] Department of Ophthalmology, Leiden University Medical Center, Leiden, the Netherlands. [3] Department of Ophthalmology, Academic Medical Center, Amsterdam, the Netherlands. |
Simpson CL |
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Simpson |
Claire L |
CL |
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National Human Genome Research Institute, US National Institutes of Health, Baltimore, Maryland, USA. |
Pennell CE |
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Pennell |
Craig E |
CE |
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School of Women's and Infants' Health, University of Western Australia, Perth, Western Australia, Australia. |
Oostra BA |
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Oostra |
Ben A |
BA |
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Department of Clinical Genetics, Erasmus Medical Center, Rotterdam, the Netherlands. |
Uitterlinden AG |
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Uitterlinden |
André G |
AG |
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1] Department of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands. [2] Department of Internal Medicine, Erasmus Medical Center, Rotterdam, the Netherlands. [3] Netherlands Consortium for Healthy Ageing, Netherlands Genomics Initiative, The Hague, the Netherlands. |
Saw SM |
|
Saw |
Seang-Mei |
SM |
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1] Singapore Eye Research Institute, Singapore National Eye Centre, Singapore. [2] Department of Ophthalmology, National University of Singapore and National University Health System, Singapore. [3] Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore. [4] Duke-National University of Singapore Graduate Medical School, Singapore. |
Lotery AJ |
|
Lotery |
Andrew J |
AJ |
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Clinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, UK. |
Bailey-Wilson JE |
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Bailey-Wilson |
Joan E |
JE |
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National Human Genome Research Institute, US National Institutes of Health, Baltimore, Maryland, USA. |
Hofman A |
|
Hofman |
Albert |
A |
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1] Department of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands. [2] Netherlands Consortium for Healthy Ageing, Netherlands Genomics Initiative, The Hague, the Netherlands. |
Vingerling JR |
|
Vingerling |
Johannes R |
JR |
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1] Department of Ophthalmology, Erasmus Medical Center, Rotterdam, the Netherlands. [2] Department of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands. |
Maubaret C |
|
Maubaret |
Cécilia |
C |
|
1] Université Bordeaux, ISPED (Institut de Santé Publique, d'Epidémiologie et de Développement), Bordeaux, France. [2] INSERM, Centre INSERM U897 Epidemiologie-Biostatistique Bordeaux, Bordeaux, France. |
Pfeiffer N |
|
Pfeiffer |
Norbert |
N |
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Department of Ophthalmology, University Medical Center Mainz, Mainz, Germany. |
Wolfs RC |
|
Wolfs |
Roger C W |
RC |
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Department of Ophthalmology, Erasmus Medical Center, Rotterdam, the Netherlands. |
Lemij HG |
|
Lemij |
Hans G |
HG |
|
Glaucoma Service, Rotterdam Eye Hospital, Rotterdam, the Netherlands. |
Young TL |
|
Young |
Terri L |
TL |
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Duke Eye Center, Duke University, Durham, North Carolina, USA. |
Pasquale LR |
|
Pasquale |
Louis R |
LR |
|
1] Channing Division of Network Medicine, Harvard Medical School, Boston, Massachusetts, USA. [2] Department of Ophthalmology, Harvard Medical School and Massachusetts Eye and Ear Infirmary, Boston, Massachusetts, USA. |
Delcourt C |
|
Delcourt |
Cécile |
C |
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1] Université Bordeaux, ISPED (Institut de Santé Publique, d'Epidémiologie et de Développement), Bordeaux, France. [2] INSERM, Centre INSERM U897 Epidemiologie-Biostatistique Bordeaux, Bordeaux, France. |
Spector TD |
|
Spector |
Timothy D |
TD |
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Department of Twin Research and Genetic Epidemiology, King's College London, London, UK. |
Klaver CC |
|
Klaver |
Caroline C W |
CC |
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1] Department of Ophthalmology, Erasmus Medical Center, Rotterdam, the Netherlands. [2] Department of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands. |
Small KS |
|
Small |
Kerrin S |
KS |
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Department of Twin Research and Genetic Epidemiology, King's College London, London, UK. |
Burdon KP |
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Burdon |
Kathryn P |
KP |
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Department of Ophthalmology, Flinders University, Adelaide, South Australia, Australia. |
Stefansson K |
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Stefansson |
Kari |
K |
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deCODE/Amgen, Reykjavik, Iceland. |
Wong TY |
|
Wong |
Tien-Yin |
TY |
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1] Singapore Eye Research Institute, Singapore National Eye Centre, Singapore. [2] Department of Ophthalmology, National University of Singapore and National University Health System, Singapore. [3] Saw Swee Hock School of Public Health, National University of Singapore and National University Health System, Singapore. |
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BMES GWAS Group |
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NEIGHBORHOOD Consortium |
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Wellcome Trust Case Control Consortium 2 |
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Viswanathan A |
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Viswanathan |
Ananth |
A |
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1] National Institute for Health Research (NIHR) Biomedical Research Centre, Moorfields Eye Hospital NHS Foundation Trust and University College London Institute of Ophthalmology, London, UK. [2]. |
Mackey DA |
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Mackey |
David A |
DA |
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1] Centre for Eye Research Australia, University of Melbourne, Royal Victorian Eye and Ear Hospital, Melbourne, Victoria, Australia. [2] Centre for Ophthalmology and Visual Science, Lions Eye Institute, University of Western Australia, Perth, Western Australia, Australia. [3]. |
Craig JE |
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Craig |
Jamie E |
JE |
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1] Department of Ophthalmology, Flinders University, Adelaide, South Australia, Australia. [2]. |
Wiggs JL |
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Wiggs |
Janey L |
JL |
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1] Department of Ophthalmology, Harvard Medical School and Massachusetts Eye and Ear Infirmary, Boston, Massachusetts, USA. [2]. |
van Duijn CM |
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van Duijn |
Cornelia M |
CM |
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1] Department of Epidemiology, Erasmus Medical Center, Rotterdam, the Netherlands. [2]. |
Hammond CJ |
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Hammond |
Christopher J |
CJ |
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1] Department of Twin Research and Genetic Epidemiology, King's College London, London, UK. [2]. |
Aung T |
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Aung |
Tin |
T |
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1] Singapore Eye Research Institute, Singapore National Eye Centre, Singapore. [2] Department of Ophthalmology, National University of Singapore and National University Health System, Singapore. [3]. |
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INVESTIGATORS |
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JOURNAL |
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VOLUME: 46 |
ISSUE: 10 |
TITLE: Nature genetics |
ISOABBREVIATION: Nat. Genet. |
YEAR: 2014 |
MONTH: Oct |
DAY: |
MEDLINEDATE: |
SEASON: |
CITEDMEDIUM: Internet |
ISSN: 1546-1718 |
ISSNTYPE: Electronic |
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MEDLINE JOURNAL |
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MEDLINETA: Nat Genet |
COUNTRY: United States |
ISSNLINKING: 1061-4036 |
NLMUNIQUEID: 9216904 |
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PUBLICATION TYPE |
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PUBLICATIONTYPE TEXT |
Journal Article |
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COMMENTS AND CORRECTIONS |
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REFTYPE |
REFSOURCE |
REFPMID |
NOTE |
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GRANTS |
|
GRANTID |
AGENCY |
COUNTRY |
CZB/4/438 |
Chief Scientist Office |
United Kingdom |
CZB/4/710 |
Chief Scientist Office |
United Kingdom |
K08 EY022943 |
NEI NIH HHS |
United States |
P30 EY014104 |
NEI NIH HHS |
United States |
R01 EY015473 |
NEI NIH HHS |
United States |
R01 EY022124 |
NEI NIH HHS |
United States |
R01 EY023512 |
NEI NIH HHS |
United States |
SRF/01/010 |
Department of Health |
United Kingdom |
U01 HG004728 |
NHGRI NIH HHS |
United States |
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GENERAL NOTE |
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KEYWORDS |
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MESH HEADINGS |
|
DESCRIPTORNAME |
QUALIFIERNAME |
ABO Blood-Group System |
genetics |
ATP Binding Cassette Transporter 1 |
genetics |
Adult |
genetics |
Aged |
genetics |
Aged, 80 and over |
genetics |
Chromosomes, Human, Pair 11 |
genetics |
Chromosomes, Human, Pair 3 |
genetics |
Chromosomes, Human, Pair 9 |
genetics |
Cohort Studies |
genetics |
Female |
genetics |
Fibronectins |
genetics |
Genetic Loci |
genetics |
Genetic Predisposition to Disease |
genetics |
Genome-Wide Association Study |
genetics |
Genotype |
genetics |
Glaucoma |
genetics |
Glaucoma, Open-Angle |
genetics |
Humans |
genetics |
Intraocular Pressure |
genetics |
Male |
genetics |
Meta-Analysis as Topic |
genetics |
Middle Aged |
genetics |
Polymorphism, Single Nucleotide |
genetics |
Risk Factors |
genetics |
Young Adult |
genetics |
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SUPPLEMENTARY MESH |
|
SUPPLMESHNAME |
SUPPLMESHTYPE |
Glaucoma, Primary Open Angle |
Disease |
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GENE SYMBOLS |
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CHEMICALS |
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REGISTRYNUMBER |
NAMEOFSUBSTANCE |
0 |
ABCA1 protein, human |
0 |
ABO Blood-Group System |
0 |
ATP Binding Cassette Transporter 1 |
0 |
FNDC3B protein, human |
0 |
Fibronectins |
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OTHER ID's |
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OTHERID |
SOURCE |
EMS59965 |
NLM |
PMC4177225 |
NLM |
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