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PMID |
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TITLE |
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Automatic clustering and population analysis of white matter tracts using maximum density paths. |
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ABSTRACT |
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We introduce a framework for population analysis of white matter tracts based on diffusion-weighted images of the brain. The framework enables extraction of fibers from high angular resolution diffusion images (HARDI); clustering of the fibers based partly on prior knowledge from an atlas; representation of the fiber bundles compactly using a path following points of highest density (maximum density path; MDP); and registration of these paths together using geodesic curve matching to find local correspondences across a population. We demonstrate our method on 4-Tesla HARDI scans from 565 young adults to compute localized statistics across 50 white matter tracts based on fractional anisotropy (FA). Experimental results show increased sensitivity in the determination of genetic influences on principal fiber tracts compared to the tract-based spatial statistics (TBSS) method. Our results show that the MDP representation reveals important parts of the white matter structure and considerably reduces the dimensionality over comparable fiber matching approaches. |
Copyright © 2014 Elsevier Inc. All rights reserved. |
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DATE PUBLISHED |
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HISTORY |
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PUBSTATUS |
PUBSTATUSDATE |
received |
2013/11/04 |
revised |
2014/03/24 |
accepted |
2014/04/08 |
aheadofprint |
2014/04/18 |
entrez |
2014/04/22 06:00 |
pubmed |
2014/04/22 06:00 |
medline |
2015/02/07 06:00 |
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AUTHORS |
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NAME |
COLLECTIVENAME |
LASTNAME |
FORENAME |
INITIALS |
AFFILIATION |
AFFILIATIONINFO |
Prasad G |
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Prasad |
Gautam |
G |
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Imaging Genetics Center, Institute for Neuroimaging & Informatics, University of Southern California, Los Angeles, CA, USA; Laboratory of Neuro Imaging, Institute for Neuroimaging & Informatics, University of Southern California, Los Angeles, CA, USA. |
Joshi SH |
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Joshi |
Shantanu H |
SH |
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Department of Neurology, University of California Los Angeles, CA, USA. |
Jahanshad N |
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Jahanshad |
Neda |
N |
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Imaging Genetics Center, Institute for Neuroimaging & Informatics, University of Southern California, Los Angeles, CA, USA; Laboratory of Neuro Imaging, Institute for Neuroimaging & Informatics, University of Southern California, Los Angeles, CA, USA. |
Villalon-Reina J |
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Villalon-Reina |
Julio |
J |
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Imaging Genetics Center, Institute for Neuroimaging & Informatics, University of Southern California, Los Angeles, CA, USA; Laboratory of Neuro Imaging, Institute for Neuroimaging & Informatics, University of Southern California, Los Angeles, CA, USA. |
Aganj I |
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Aganj |
Iman |
I |
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Martinos Center for Biomedical Imaging, Radiology Department, Massachusetts General Hospital, Harvard Medical School, Boston, MA, USA. |
Lenglet C |
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Lenglet |
Christophe |
C |
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Center for Magnetic Resonance Research, Department of Radiology, University of Minnesota, Minneapolis, MN, USA. |
Sapiro G |
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Sapiro |
Guillermo |
G |
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Dept. of Electrical and Computer Engineering, Computer Science, Duke University, NC, USA; Dept. of Biomedical Engineering, Duke University, NC, USA. |
McMahon KL |
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McMahon |
Katie L |
KL |
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Center for Advanced Imaging, University of Queensland, Brisbane, Australia. |
de Zubicaray GI |
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de Zubicaray |
Greig I |
GI |
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School of Psychology, University of Queensland, Brisbane, Australia. |
Martin NG |
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Martin |
Nicholas G |
NG |
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QIMR Berghofer Medical Research Institute, Herston, Australia. |
Wright MJ |
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Wright |
Margaret J |
MJ |
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School of Psychology, University of Queensland, Brisbane, Australia; QIMR Berghofer Medical Research Institute, Herston, Australia. |
Toga AW |
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Toga |
Arthur W |
AW |
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Imaging Genetics Center, Institute for Neuroimaging & Informatics, University of Southern California, Los Angeles, CA, USA; Laboratory of Neuro Imaging, Institute for Neuroimaging & Informatics, University of Southern California, Los Angeles, CA, USA; Dept. of Neurology, Psychiatry, Engineering, Radiology, University of Southern California, Los Angeles, CA, USA; Dept. of Ophthalmology, University of Southern California, Los Angeles, CA, USA. |
Thompson PM |
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Thompson |
Paul M |
PM |
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Imaging Genetics Center, Institute for Neuroimaging & Informatics, University of Southern California, Los Angeles, CA, USA; Laboratory of Neuro Imaging, Institute for Neuroimaging & Informatics, University of Southern California, Los Angeles, CA, USA; Department of Neurology, University of California Los Angeles, CA, USA; Dept. of Neurology, Psychiatry, Engineering, Radiology, University of Southern California, Los Angeles, CA, USA; Dept. of Ophthalmology, University of Southern California, Los Angeles, CA, USA; Department of Pediatrics, University of Southern California, Los Angeles, CA, USA. Electronic address: pthomp@usc.edu. |
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INVESTIGATORS |
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JOURNAL |
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VOLUME: 97 |
ISSUE: |
TITLE: NeuroImage |
ISOABBREVIATION: Neuroimage |
YEAR: 2014 |
MONTH: Aug |
DAY: 15 |
MEDLINEDATE: |
SEASON: |
CITEDMEDIUM: Internet |
ISSN: 1095-9572 |
ISSNTYPE: Electronic |
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MEDLINE JOURNAL |
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MEDLINETA: Neuroimage |
COUNTRY: United States |
ISSNLINKING: 1053-8119 |
NLMUNIQUEID: 9215515 |
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PUBLICATION TYPE |
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PUBLICATIONTYPE TEXT |
Journal Article |
Research Support, N.I.H., Extramural |
Research Support, Non-U.S. Gov't |
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COMMENTS AND CORRECTIONS |
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REFTYPE |
REFSOURCE |
REFPMID |
NOTE |
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GRANTS |
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GRANTID |
AGENCY |
COUNTRY |
AG040060 |
NIA NIH HHS |
United States |
EB008432 |
NIBIB NIH HHS |
United States |
MH097268 |
NIMH NIH HHS |
United States |
NS080655 |
NINDS NIH HHS |
United States |
P41 EB015922 |
NIBIB NIH HHS |
United States |
R01 AG040060 |
NIA NIH HHS |
United States |
R01 EB008432 |
NIBIB NIH HHS |
United States |
R01 MH097268 |
NIMH NIH HHS |
United States |
R01 NS080655 |
NINDS NIH HHS |
United States |
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GENERAL NOTE |
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KEYWORDS |
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KEYWORD |
Atlas |
Brain |
Clustering |
Connectivity |
Curve registration |
Dijkstra |
Geodesic distance |
HARDI |
Hough |
Longest path |
MRI |
Maximum density path |
Shortest path |
Tractography |
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MESH HEADINGS |
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DESCRIPTORNAME |
QUALIFIERNAME |
Algorithms |
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Anisotropy |
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Cluster Analysis |
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Diffusion Tensor Imaging |
methods |
Female |
methods |
Humans |
methods |
Image Processing, Computer-Assisted |
methods |
Male |
methods |
Nerve Fibers |
methods |
Neural Pathways |
cytology |
Reproducibility of Results |
cytology |
White Matter |
cytology |
Young Adult |
cytology |
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SUPPLEMENTARY MESH |
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GENE SYMBOLS |
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CHEMICALS |
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OTHER ID's |
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OTHERID |
SOURCE |
NIHMS587313 |
NLM |
PMC4065851 |
NLM |
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