| Class | Global |
| Name | set iteration |
| Arguments | <number of iterations> |
Controls the number of iterations used by the various Monte Carlo algorithms. Default is 200 iterations. Setting ite to zero means the Monte Carlo procedures are not performed.
Example:
>> set iteration NOTE: Number of MC iterations 200 >> hwe D14S52 -------------------------------------------------- Hardy-Weinberg equilibrium for marker loci -------------------------------------------------- Marker Typed Genos Chi-square Asy P Emp P Iters ---------- ------ ------ ---------- ------ ------ ------ D14S52 21 28 18.3 0.6278 0.1443 201 HWE . >> set iter 0 NOTE: Number of MC iterations 0 >> hwe D14S52 -------------------------------------------------- Hardy-Weinberg equilibrium for marker loci -------------------------------------------------- Marker Typed Genos Chi-square Asy P Emp P Iters ---------- ------ ------ ---------- ------ ------ ------ D14S52 21 28 18.3 0.6278 1.0000 0 HWE . >> set iter 5000 NOTE: Number of MC iterations 5000 >> hwe D14S52 -------------------------------------------------- Hardy-Weinberg equilibrium for marker loci -------------------------------------------------- Marker Typed Genos Chi-square Asy P Emp P Iters ---------- ------ ------ ---------- ------ ------ ------ D14S52 21 28 18.3 0.6278 0.0903 554 HWE +
| << (set burn-in) | Up to index | >> (set emit) |