Class | Algebraic operators and function |
Name | alla | allb |
Arguments | <marker> |
Return the first or second allele for each individual at the given marker.
Example:
>> count alla D14S53 == 151 or allb D14S53 == 151 Count where "alla D14S53 = = 151 or allb D14S53 = = 151": Pedigree Con=T Num ASPs Trios 4+ -------------- ----- ----- ----- ----- ----- Total 19 77 1 3 0 >> tab D14S53 ------------------------------------ Tabulation of "D14S53 " ------------------------------------ D14S53 Count Percent ----------------------------- 144/144 1 5.0 144/151 6 30.0 148/151 1 5.0 149/151 1 5.0 151/151 6 30.0 151/155 4 20.0 151/157 1 5.0 ----------------------------- Total 20 (and 57 missing)
>> macro mkdummy >> set loc %1_%2 qua >> %1_%2 = 0 >> if (alla %1 == %2) then %1_%2 = %1_%2 + 1 >> if (allb %1 == %2) then %1_%2 = %1_%2 + 1 >> if (untyp %1) then %1_%2 = x >> ;;;; >> mkdummy D14S53 { 144 148 149 151 155 157 }
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