Sib-pair Command: flip


ClassAnalysis and data manipulation command
Nameflip
Arguments <marker> [to <marker2> ] [...<markerN>].

Recode SNP marker alleles to the complementary strand coding ie "[ACGT]" -> "[TGCA]".

Example:

>> wri
 1 1 x x m   A/G
 1 2 x x f   G/G
 1 3 1 2 m   A/G

>> flip $m
Recoding alleles at "m1" to complement.

>> wri
  1 1 x x m   C/T
  1 2 x x f   C/C
  1 3 1 2 m   C/T

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