Class | Analysis and data manipulation command |
Name | frequencies | describe |
Arguments | [[<codominant marker>| <binary trait>| <quantitative trait>]...[to]...<trait>] | snp. |
Print allele frequencies for marker loci, segregation ratios for binary trait, or means, variances, familial correlations and a sibship variance test for a quantitative trait. Default is to describe all loci. The snp option prints minor allele frequencies and number typed for all diallelic marker loci.
Example:
>> include williamsex.in >> describe >> frequencies snp
<< (typed) | Up to index | >> (mcf) |