Sib-pair Command: show loci


ClassGlobal
Nameshow loci
Arguments

List of active loci along with table of numbers available.

Example:

>> include cavanaughex.in
>> show loci 
Pedigree file         = "inline.ped"
Number of active loci =      9 of      9
Number of active peds =     54 of     54
Number of active peds =     54 of     54
Number of active inds =    231 of    231
Dataset occupies      =    0.0 Mb

Locus      Type          Position   Typed
---------- ----  ----------------  ------
ibd         a          6              231 (100.0%)   
D16S769     m          7--      8     204 ( 88.3%)   26066263 (chr 16)
D16S3145    m          9--     10     215 ( 93.1%)   26784604 (chr 16)
D16S753     m         11--     12     219 ( 94.8%)   31181005 (chr 16)
D16S409     m         13--     14     213 ( 92.2%)   47333369 (chr 16)
D16S411     m         15--     16     215 ( 93.1%)   48294236 (chr 16)
D16S419     m         17--     18     217 ( 93.9%)   51510863 (chr 16)
D16S415     m         19--     20     210 ( 90.9%)   52228236 (chr 16)
D16S771     m         21--     22     212 ( 91.8%)   53066505 (chr 16)

See also:

eval (ls) Locus listing from Scheme
infoprogram information
ls List loci
show idstabulate IDs
show macroslist macros
show mapshow linkage map
show pedigreestabulate pedigrees
whichlist positions of loci


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